AMCG00017397



Basic Information


Item Value
gene id AMCG00017397
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 1600591 ~ 1601058 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00017397
ATGTGTGATTGTGTAAGAGAGCAGAATAAAACCTGTGCTGgatgttttaaagaaatatggGAAAATAACAAGGCAGTTTCAATTGTCCTGGTTTGGGGTTTGGCTGAGTGGCAGCAACGTGAGTACCAAATTATACTGCATGTTTGCTTCTGTAAACCAAATGATCAGTTTGGACAAGGCATGCTTGATGGTAATGATGATGGGAAAAATCTCTCATCACAGGAGCACGTAAGTAATGAGGTTTCCCTGAAATGCTTAGAGTGGGAATGCACTTCTATAGATGTGCTGCTCAGCTGGCAAAGGCACCATGCTGTTGTTGAGCACAACGAAAACATGTGGAAGAAATTGCAGATTTTGAAGAGGCTTGTCAATATCTCAGCTGTCCTGTCTTATCAAGTGCTTGCATTCTATGACCATCGTGAAACAGAGGATTCCAACAACTAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00017397 True 444 mRNA 0.42 2 1600591 1601058

Neighbor


gene id symbol gene type direction distance location
AMCG00017396 NA coding downstream 301 1599588 ~ 1600290 (-)
AMCG00017395 tlx2,LOC106611621,LOC106604594 coding downstream 39405 1555528 ~ 1561186 (-)
AMCG00017394 LOC106604596,LOC105028255,LOC106611619,LOC103363938,LOC104951404 coding downstream 153010 1438528 ~ 1447581 (-)
AMCG00017393 pcgf1,LOC107589114,LOC107710472,LOC107660820 coding downstream 311158 1275232 ~ 1289433 (-)
AMCG00017391 NA coding downstream 663915 935881 ~ 936676 (-)
AMCG00017400 NA coding upstream 103888 1704946 ~ 1707277 (-)
AMCG00017401 NA coding upstream 170355 1771413 ~ 1781208 (-)
AMCG00017409 loxl3,LOC106612874 coding upstream 336064 1937122 ~ 1946925 (-)
AMCG00017410 NA coding upstream 347102 1948160 ~ 1964564 (-)
AMCG00017407 loxl3,LOC108441751 coding upstream 384563 1985621 ~ 1993541 (-)
G89940 NA non-coding downstream 241610 1358684 ~ 1358981 (-)
G89939 NA non-coding downstream 259502 1340872 ~ 1341089 (-)
G89912 NA non-coding downstream 561120 1039272 ~ 1039471 (-)
G89909 nanos1,nano1,LOC105894108,LOC106611616 non-coding downstream 629163 968543 ~ 971428 (-)
G89900 NA non-coding downstream 688943 911396 ~ 911648 (-)
G90017 NA non-coding upstream 226622 1827680 ~ 1831528 (-)
G90066 LOC107678491 non-coding upstream 324150 1925208 ~ 1926851 (-)
G90093 NA non-coding upstream 453781 2054839 ~ 2055363 (-)
G90098 NA non-coding upstream 477982 2079040 ~ 2079244 (-)
G90129 NA non-coding upstream 584327 2185385 ~ 2185739 (-)
AMCG00017384 LOC106911887,LOC104963986 other downstream 1248805 160054 ~ 351786 (-)
G89804 NA other downstream 1494706 105685 ~ 105885 (-)
AMCG00017418 NA other upstream 1000725 2601783 ~ 2615562 (-)
AMCG00017426 NA other upstream 1110244 2711302 ~ 2841894 (-)
G90400 NA other upstream 2941717 4542775 ~ 4544760 (-)
G90501 NA other upstream 3557326 5158384 ~ 5221021 (-)
G90502 NA other upstream 3621415 5222473 ~ 5223047 (-)

Expression



Co-expression Network