Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017410 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 1948160 ~ 1964564 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017410 | True | 501 | mRNA | 0.56 | 4 | 1948160 | 1964564 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017409 | loxl3,LOC106612874 | coding | downstream | 1235 | 1937122 ~ 1946925 (-) |
| AMCG00017401 | NA | coding | downstream | 166952 | 1771413 ~ 1781208 (-) |
| AMCG00017400 | NA | coding | downstream | 240883 | 1704946 ~ 1707277 (-) |
| AMCG00017397 | NA | coding | downstream | 347102 | 1600591 ~ 1601058 (-) |
| AMCG00017396 | NA | coding | downstream | 347870 | 1599588 ~ 1600290 (-) |
| AMCG00017407 | loxl3,LOC108441751 | coding | upstream | 21057 | 1985621 ~ 1993541 (-) |
| AMCG00017408 | pank2,LOC107391889,LOC107103406,LOC101161204 | coding | upstream | 41195 | 2005759 ~ 2015562 (-) |
| AMCG00017406 | NA | coding | upstream | 58868 | 2023432 ~ 2032216 (-) |
| AMCG00017414 | NA | coding | upstream | 111614 | 2076178 ~ 2427127 (-) |
| AMCG00017417 | letm1 | coding | upstream | 564351 | 2528915 ~ 2566277 (-) |
| G90066 | LOC107678491 | non-coding | downstream | 21309 | 1925208 ~ 1926851 (-) |
| G90017 | NA | non-coding | downstream | 116632 | 1827680 ~ 1831528 (-) |
| G89940 | NA | non-coding | downstream | 589179 | 1358684 ~ 1358981 (-) |
| G89939 | NA | non-coding | downstream | 607071 | 1340872 ~ 1341089 (-) |
| G89912 | NA | non-coding | downstream | 908689 | 1039272 ~ 1039471 (-) |
| G90093 | NA | non-coding | upstream | 90275 | 2054839 ~ 2055363 (-) |
| G90098 | NA | non-coding | upstream | 114476 | 2079040 ~ 2079244 (-) |
| G90129 | NA | non-coding | upstream | 220821 | 2185385 ~ 2185739 (-) |
| G90139 | NA | non-coding | upstream | 320661 | 2285225 ~ 2285529 (-) |
| G90157 | NA | non-coding | upstream | 408546 | 2373110 ~ 2464259 (-) |
| AMCG00017384 | LOC106911887,LOC104963986 | other | downstream | 1596374 | 160054 ~ 351786 (-) |
| G89804 | NA | other | downstream | 1842275 | 105685 ~ 105885 (-) |
| AMCG00017418 | NA | other | upstream | 637219 | 2601783 ~ 2615562 (-) |
| AMCG00017426 | NA | other | upstream | 746738 | 2711302 ~ 2841894 (-) |
| G90400 | NA | other | upstream | 2578211 | 4542775 ~ 4544760 (-) |
| G90501 | NA | other | upstream | 3193820 | 5158384 ~ 5221021 (-) |
| G90502 | NA | other | upstream | 3257909 | 5222473 ~ 5223047 (-) |
