AMCG00017414


Basic Information

Item Value
gene id AMCG00017414
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 2076178 ~ 2427127 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017414
ATGGTCCCGAAACCACAGAGACTGAAGCCCGCGTGGGGCTGGGGCAATGGGGCAAACCCTGCTCTTCACATGCTGTCTGACCAGGACCCAACACCCCCGGAACAGCCAGCTCCACACAGTGTTGCAGAATGTGAGATGGCCCCTAGCAAGGTCAATGGGCCATCGAGAAGTGAAGAATCACTGGGGGAGTCTATGGGGTCAGCTGAGGCACAGGTCTACAGGCGTTCTCTTGACGAGAGACATAAGATGTTCTCTGGCTGTACTTCCCCTGGTAGCAGTGACAGCACCACCATGAGATTGGCTGTGGCTGTGCTTGGCGAGGCTGCGAGGCATCTGGTCGAATGTTCAGTTAAAGAGTGCCTGGAAGGAGTCAGGGACTTTGAAAATCATCAGAAGAAATCACATGAGCACAGTATTAATGgatcCAAAGCCCTGGTAACTGTAAATCAGTCACCTGCCACAATTGCTGTTCGGGGCGCCTTCATCTGGCCTGGCCTTCTCCCCCGCCAACAAGCTGCTCTTTGTCACCTGGGCCTAGGCAACAAGATCATCTTCTACGACACCTCCATCAAGATGTTATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017414 True 582 mRNA 0.54 8 2076178 2427127

Neighbor

gene id symbol gene type direction distance location
AMCG00017406 NA coding downstream 43962 2023432 ~ 2032216 (-)
AMCG00017408 pank2,LOC107391889,LOC107103406,LOC101161204 coding downstream 60616 2005759 ~ 2015562 (-)
AMCG00017407 loxl3,LOC108441751 coding downstream 82637 1985621 ~ 1993541 (-)
AMCG00017410 NA coding downstream 111614 1948160 ~ 1964564 (-)
AMCG00017409 loxl3,LOC106612874 coding downstream 129253 1937122 ~ 1946925 (-)
AMCG00017417 letm1 coding upstream 101788 2528915 ~ 2566277 (-)
AMCG00017425 NA coding upstream 414795 2841922 ~ 3087650 (-)
AMCG00017430 ctnna2 coding upstream 1002494 3429621 ~ 3487525 (-)
AMCG00017431 ctnna2,LOC102793143,LOC107706127,LOC103137875 coding upstream 1102556 3529683 ~ 3539396 (-)
AMCG00017434 ctnna2,ctnna1,LOC107594905,LOC107750356 coding upstream 1310686 3737813 ~ 3747843 (-)
G90093 NA non-coding downstream 20815 2054839 ~ 2055363 (-)
G90066 LOC107678491 non-coding downstream 149327 1925208 ~ 1926851 (-)
G90017 NA non-coding downstream 244650 1827680 ~ 1831528 (-)
G89940 NA non-coding downstream 717197 1358684 ~ 1358981 (-)
G89939 NA non-coding downstream 735089 1340872 ~ 1341089 (-)
G90221 suclg1,LOC107746879 non-coding upstream 294299 2721426 ~ 2722298 (-)
G90226 NA non-coding upstream 409392 2836519 ~ 2836798 (-)
G90243 NA non-coding upstream 512123 2939250 ~ 2939477 (-)
G90244 NA non-coding upstream 512808 2939935 ~ 2940143 (-)
G90252 NA non-coding upstream 927938 3355065 ~ 3355489 (-)
AMCG00017384 LOC106911887,LOC104963986 other downstream 1724392 160054 ~ 351786 (-)
G89804 NA other downstream 1970293 105685 ~ 105885 (-)
AMCG00017418 NA other upstream 174656 2601783 ~ 2615562 (-)
AMCG00017426 NA other upstream 284175 2711302 ~ 2841894 (-)
G90400 NA other upstream 2115648 4542775 ~ 4544760 (-)
G90501 NA other upstream 2731257 5158384 ~ 5221021 (-)
G90502 NA other upstream 2795346 5222473 ~ 5223047 (-)

Expression


Co-expression Network