AMCG00017419


Basic Information

Item Value
gene id AMCG00017419
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 2662686 ~ 2664553 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017419
ATGGAGAGACCAGTGCTCAATCTGCACCATCCACACCGGACCTGTCCACCTCGGCTGAGCAGCGAACCCCTCCTGGTGGAAGCAGGACAAGCAGAGGAGGTTGAAGATGATGAAGATGTGGTGTTTGTGGCAGTGGTGCGCGCTGCTCAGACGGAGGAAGAGCGTCTGCAGGTTAGTGTGGACCCTCCATCAGAAGGCGATGCGCCGGAGCCTGGGGAACATGAGGACTATCTCCTGGTCACTGTGGGAGCTGACGGACAGGAGCTGGAGGGTCATGATCAGTATCTCCTGGTCACAGTGGGAGCTGATGGACAGGAGCTGGAGGGTCATGATCAGTATCTCCTGATTCCTGTGGCAAATTATGGAGAGGATCCTGGGGTACAGGAATGGGAATACCTGCCTGTGGGCTTTGTGCTCTTGTTCCTGCTCAGACGGCGATCTGGTGGTGTCTTTGGAGACGGATTGAACGCATCGCAGACTGAACTCCTGCCCACCAAGCGGTTCGATCCGGCCCACAGTGGAGGGAAGACAGCATGTCAAGTGTGCCTGATGGACTTCGATGAGGACGAGGAGCTGAGGACCCTGCCCTGCCTGCACGACTACCACGTGCGGTGTGTGGATCGCTGGCTAGAGGACAACACATCCCGTCCCATTTGCCGATGGGACGTCAGATCAGCCTTCGAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017419 True 687 mRNA 0.57 5 2662686 2664553

Neighbor

gene id symbol gene type direction distance location
AMCG00017416 NA coding upstream 13203 2646274 ~ 2649483 (+)
AMCG00017415 LOC103458261,LOC105909588 coding upstream 63716 2573489 ~ 2598970 (+)
AMCG00017413 fgfr3 coding upstream 202167 2427893 ~ 2460519 (+)
AMCG00017412 NA coding upstream 533174 2107891 ~ 2129512 (+)
AMCG00017405 NA coding upstream 613280 2047677 ~ 2049406 (+)
AMCG00017424 NA coding downstream 10398 2674951 ~ 2683508 (+)
AMCG00017421 NA coding downstream 31556 2696109 ~ 2708643 (+)
AMCG00017420 NA coding downstream 44518 2709071 ~ 2712473 (+)
AMCG00017423 suclg1,LOC107674246,LOC106602756 coding downstream 48604 2713157 ~ 2726827 (+)
AMCG00017427 NA coding downstream 611110 3275663 ~ 3481722 (+)
G90149 NA non-coding upstream 133885 2491907 ~ 2528801 (+)
G90144 NA non-coding upstream 158522 2461882 ~ 2504164 (+)
G90070 NA non-coding upstream 658080 2003038 ~ 2004606 (+)
G90042 NA non-coding upstream 727902 1929142 ~ 1934784 (+)
G89983 NA non-coding upstream 1072881 1580983 ~ 1589805 (+)
G90248 NA non-coding downstream 572892 3237445 ~ 3237726 (+)
G90284 NA non-coding downstream 1233265 3897818 ~ 3898125 (+)
G90333 NA non-coding downstream 1647705 4312258 ~ 4312475 (+)
G90337 NA non-coding downstream 1665817 4330370 ~ 4330583 (+)
G90338 NA non-coding downstream 1720688 4385241 ~ 4390541 (+)
AMCG00017388 LOC108267694,LOC106608525 other upstream 2450750 207586 ~ 211936 (+)
AMCG00017386 dctn1,LOC101464740 other upstream 2564289 48007 ~ 98397 (+)
AMCG00017422 leprotl1,LOC103152176 other downstream 22867 2687420 ~ 2695453 (+)
AMCG00017445 NA other downstream 1928249 4592802 ~ 4606571 (+)
AMCG00017446 NA other downstream 1998072 4662625 ~ 4688223 (+)
AMCG00017486 NA other downstream 4065185 6729738 ~ 7188643 (+)
G90877 NA other downstream 5003630 7668183 ~ 7671850 (+)

Expression


Co-expression Network