AMCG00017420


Basic Information

Item Value
gene id AMCG00017420
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 2709071 ~ 2712473 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017420
GACTTCTGTGACGTAAGCGTGGTCAAGAGATTTCGGTTTATCCCAGCGTGGGGGTGTGGACCTGCTCTGACTTCGGAGGTggattatattgtattgtattgcatattGCATGGGTGTATTGCTGCAGTCACGTTATTTGTGAGGGATTGCGTCACCAGAATCGATTAGCAGGCTTTCCGCTTTCACATTTAAAGGCGCATAACTTCTGTTTGCGAAGTTGATGGCGCTGGTGTTTATGTTGCGGTAGTCCATTGATTGAGGAGCACTGCCAGTATCCTGTtgttgtttccccccccccctctcgtTATAGCGGTCAAACTTTTGCACACATAATGCGCTGCGCTTTTTCATCGTTGATGTTTTAGTTGTAATCTTTTTTTAGGCATTTTGCTCGAAGTGAAACATGCCCGGTGTCCGAGAGGCAGGGTTGCTGGGAGCTGCTTTTGCGGTTACCGGAGGATTTGCCTATGCCATCTGGAGTTACTTATCTCCGGGGCAGAAAGAGGAGAAGGCGAGCGCTGAAAATACCGGAGAAGTACCAGCAGTTACAGAGGTGAAATCTGCCAACAAACAGGTTCTTGTGCTAGGGCTGGATGGAGCTGGAAAGACCAGTGTGCTGCACTGTCTGGCCACTGGCACTGTGAAGAGGAGCGTGTCTCCCACAGAAGGCTTCAATGCTGTCTGCATTAATAAAGAAGACATGCAGATTGAGTTCTTAGAAATTGGCGGTAGTGAAAAGCTGAGGACGTATTGGAATATGTACCTCGGCAAGGCCCAGGTGTTGGTGTTTGTAGTGGACTCTGCTGACCCGGACCGCTTTCCTTTGGCAAAGACGCACCTTCATGGACTGATAAAGAATGACTCCTGCTTGCCATTAGTGGTTTTAGTCAATAAACAGGATTTGCAGGGTGCCTGCAGTATTACAGAGATGCATGATGCTTTGTCGTTGTCTGAAGTGGGGGATGAAAGAAAGCTCTTCATTATCAGCACACATGTGAAAAAGGATGACTTGCAGGTCCCATCTAGCGTACAGGATGCACGGGAGCTTATTACTCAGCTGGTGTCAGAAAGTAGATAAAAGTATTTGTATAACTTGCCCAATGTGAGAGAAATGtttaatgtagtttttgttttgtttttgtttttatgagtaTCCCACAGTATAAGTATCCTAAGTAACAGTTCAGAGTGTTTCTGATTCAGAAGATACAATATTTAAACTGGTTagttagctttttttttttttttttttggtttgttgtgcATCAGTTCTCCTGTTGGTTACTATCTATGAGTCTTTTTTtctaagttattatttttaatattcattgtttggtggttttggttttgtacttaaaaatgctttacattttcttcttaagatatatagtttattacaaacaaagcTAAAgggttgttggtttgttttgaagaatatatttgcataaaatatattttctatcaTTGATAGCTAATAATCACAACGACTACAACCAATGAAAAGCTTGGCTATGTGAGGTGTGAAAATCGGTAGATCTATAATTCACCTTATCTACTCATCTGCAATATTTTAAGCCAAGCTTAGTTGCTGCAGTTTTTCAATTGAAATTGCTGAacttctgtaaaaaaataaataaaagcttt

Function

GO: NA

KEGG:

id description
K07957 ARL9; ADP-ribosylation factor-like protein 9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017420 True 1644 mRNA 0.41 4 2709071 2712473

Neighbor

gene id symbol gene type direction distance location
AMCG00017421 NA coding upstream 428 2696109 ~ 2708643 (+)
AMCG00017424 NA coding upstream 25563 2674951 ~ 2683508 (+)
AMCG00017419 NA coding upstream 44518 2662686 ~ 2664553 (+)
AMCG00017416 NA coding upstream 59588 2646274 ~ 2649483 (+)
AMCG00017415 LOC103458261,LOC105909588 coding upstream 110101 2573489 ~ 2598970 (+)
AMCG00017423 suclg1,LOC107674246,LOC106602756 coding downstream 684 2713157 ~ 2726827 (+)
AMCG00017427 NA coding downstream 563190 3275663 ~ 3481722 (+)
AMCG00017428 lrrtm1,LOC107706126,LOC107551676,LOC107689474,LOC107558618,LOC107711523 coding downstream 854787 3567260 ~ 3568720 (+)
AMCG00017429 NA coding downstream 1476775 4189248 ~ 4199454 (+)
AMCG00017439 rnf24,LOC107689472 coding downstream 1670859 4383332 ~ 4384747 (+)
G90149 NA non-coding upstream 180270 2491907 ~ 2528801 (+)
G90144 NA non-coding upstream 204907 2461882 ~ 2504164 (+)
G90070 NA non-coding upstream 704465 2003038 ~ 2004606 (+)
G90042 NA non-coding upstream 774287 1929142 ~ 1934784 (+)
G89983 NA non-coding upstream 1119266 1580983 ~ 1589805 (+)
G90248 NA non-coding downstream 524972 3237445 ~ 3237726 (+)
G90284 NA non-coding downstream 1185345 3897818 ~ 3898125 (+)
G90333 NA non-coding downstream 1599785 4312258 ~ 4312475 (+)
G90337 NA non-coding downstream 1617897 4330370 ~ 4330583 (+)
G90338 NA non-coding downstream 1672768 4385241 ~ 4390541 (+)
AMCG00017422 leprotl1,LOC103152176 other upstream 13618 2687420 ~ 2695453 (+)
AMCG00017388 LOC108267694,LOC106608525 other upstream 2497135 207586 ~ 211936 (+)
AMCG00017386 dctn1,LOC101464740 other upstream 2610674 48007 ~ 98397 (+)
AMCG00017445 NA other downstream 1880329 4592802 ~ 4606571 (+)
AMCG00017446 NA other downstream 1950152 4662625 ~ 4688223 (+)
AMCG00017486 NA other downstream 4017265 6729738 ~ 7188643 (+)
G90877 NA other downstream 4955710 7668183 ~ 7671850 (+)
G90881 NA other downstream 4980112 7692585 ~ 7693347 (+)

Expression


Co-expression Network