AMCG00017424


Basic Information

Item Value
gene id AMCG00017424
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 2674951 ~ 2683508 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017424
ATGTCTGACTGGACGGCGTTTCTCGACTCGTCGAGTGCGGCCAGCGACTCCGAGGCCCACGGCGGCCTCCCTCCTGCAGCGCCGAGGATCCTGGAAAGCAACTTTGAGATCCAGGAGGAAGAATATGACCAACAGACTGAAGCTCTGAAGGAGGAGGTGGAATATCAGTGTGAAGGAttcttcaagaaaaataaagacacagtAAATGAGGAGCAGATCAATGTCCTGAAAACAAGCAAGTTCCGCAGCTCTCTGCAGCAGCTCATGGAAACCCTGAATGGCGGCACCCCACACTACGTGCGCTGTGTCCAGCCAAATGACCACAAGCACCCTCACAGGGTTTCTGAGGTCAGCCTGCACAACACGCACACTGAGACCTTCAGCTTCATCAGCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017424 True 396 mRNA 0.54 5 2674951 2683508

Neighbor

gene id symbol gene type direction distance location
AMCG00017419 NA coding upstream 10398 2662686 ~ 2664553 (+)
AMCG00017416 NA coding upstream 25468 2646274 ~ 2649483 (+)
AMCG00017415 LOC103458261,LOC105909588 coding upstream 75981 2573489 ~ 2598970 (+)
AMCG00017413 fgfr3 coding upstream 214432 2427893 ~ 2460519 (+)
AMCG00017412 NA coding upstream 545439 2107891 ~ 2129512 (+)
AMCG00017421 NA coding downstream 12601 2696109 ~ 2708643 (+)
AMCG00017420 NA coding downstream 25563 2709071 ~ 2712473 (+)
AMCG00017423 suclg1,LOC107674246,LOC106602756 coding downstream 29649 2713157 ~ 2726827 (+)
AMCG00017427 NA coding downstream 592155 3275663 ~ 3481722 (+)
AMCG00017428 lrrtm1,LOC107706126,LOC107551676,LOC107689474,LOC107558618,LOC107711523 coding downstream 883752 3567260 ~ 3568720 (+)
G90149 NA non-coding upstream 146150 2491907 ~ 2528801 (+)
G90144 NA non-coding upstream 170787 2461882 ~ 2504164 (+)
G90070 NA non-coding upstream 670345 2003038 ~ 2004606 (+)
G90042 NA non-coding upstream 740167 1929142 ~ 1934784 (+)
G89983 NA non-coding upstream 1085146 1580983 ~ 1589805 (+)
G90248 NA non-coding downstream 553937 3237445 ~ 3237726 (+)
G90284 NA non-coding downstream 1214310 3897818 ~ 3898125 (+)
G90333 NA non-coding downstream 1628750 4312258 ~ 4312475 (+)
G90337 NA non-coding downstream 1646862 4330370 ~ 4330583 (+)
G90338 NA non-coding downstream 1701733 4385241 ~ 4390541 (+)
AMCG00017388 LOC108267694,LOC106608525 other upstream 2463015 207586 ~ 211936 (+)
AMCG00017386 dctn1,LOC101464740 other upstream 2576554 48007 ~ 98397 (+)
AMCG00017422 leprotl1,LOC103152176 other downstream 3912 2687420 ~ 2695453 (+)
AMCG00017445 NA other downstream 1909294 4592802 ~ 4606571 (+)
AMCG00017446 NA other downstream 1979117 4662625 ~ 4688223 (+)
AMCG00017486 NA other downstream 4046230 6729738 ~ 7188643 (+)
G90877 NA other downstream 4984675 7668183 ~ 7671850 (+)

Expression


Co-expression Network