AMCG00017425


Basic Information

Item Value
gene id AMCG00017425
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 2841922 ~ 3087650 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017425
ATGGCTCAGATACGAGGACGAGGACTGACAGCAATtCTAAATtggCTGGTGAAGCTGAACCTGGaaaGCTGGGCGGCGGCGGTGAAGGCGGCGACCGCTGGGCACTCGGGCTGGGCGGCAgcaatgagcagacagaaaccaaggagaatcgaaaggcgaggtcgagCTGTGAGGGAGGATATGTACTATAAAGATGGGAGGATTGTAGCTGTGTGTATCGTGCATGCTCCATGTTTCTTCTCTCAAACCCTGTTTGATTGCCTTGTCATTGGCCCAGAAACAGCCAAGCCAGTCACTGAAGATATTTCTGACctgaattatttgaaaatGCTTAAGGAGGGTATGAAAACACTTGCACGTTTGGAGAAGATTAAACAGTACCCAGAATTATTCCATCCTCTACTACCCCTTACACTCACTGCTGAGATCTTGGATGACTCTTCTATATTAGGTTTGCTCCAACTGGAAGTAACCAAAGACTTACAGAAAGCAGAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017425 True 498 mRNA 0.48 7 2841922 3087650

Neighbor

gene id symbol gene type direction distance location
AMCG00017417 letm1 coding downstream 275645 2528915 ~ 2566277 (-)
AMCG00017414 NA coding downstream 414795 2076178 ~ 2427127 (-)
AMCG00017406 NA coding downstream 809706 2023432 ~ 2032216 (-)
AMCG00017408 pank2,LOC107391889,LOC107103406,LOC101161204 coding downstream 826360 2005759 ~ 2015562 (-)
AMCG00017407 loxl3,LOC108441751 coding downstream 848381 1985621 ~ 1993541 (-)
AMCG00017430 ctnna2 coding upstream 341971 3429621 ~ 3487525 (-)
AMCG00017431 ctnna2,LOC102793143,LOC107706127,LOC103137875 coding upstream 442033 3529683 ~ 3539396 (-)
AMCG00017434 ctnna2,ctnna1,LOC107594905,LOC107750356 coding upstream 650163 3737813 ~ 3747843 (-)
AMCG00017432 ctnna2,LOC107552348,LOC103137937,LOC107706127 coding upstream 688844 3776494 ~ 3799472 (-)
AMCG00017437 NA coding upstream 819802 3907452 ~ 3908488 (-)
G90226 NA non-coding downstream 5124 2836519 ~ 2836798 (-)
G90221 suclg1,LOC107746879 non-coding downstream 119624 2721426 ~ 2722298 (-)
G90157 NA non-coding downstream 377663 2373110 ~ 2464259 (-)
G90139 NA non-coding downstream 556393 2285225 ~ 2285529 (-)
G90129 NA non-coding downstream 656183 2185385 ~ 2185739 (-)
G90252 NA non-coding upstream 267415 3355065 ~ 3355489 (-)
G90255 LOC100846954 non-coding upstream 316836 3404486 ~ 3404766 (-)
G90281 NA non-coding upstream 584645 3672295 ~ 3685214 (-)
G90287 NA non-coding upstream 867238 3954888 ~ 3955136 (-)
G90289 NA non-coding upstream 954037 4041687 ~ 4041894 (-)
AMCG00017426 NA other downstream 28 2711302 ~ 2841894 (-)
AMCG00017418 NA other downstream 226360 2601783 ~ 2615562 (-)
AMCG00017384 LOC106911887,LOC104963986 other downstream 2490136 160054 ~ 351786 (-)
G89804 NA other downstream 2736037 105685 ~ 105885 (-)
G90400 NA other upstream 1455125 4542775 ~ 4544760 (-)
G90501 NA other upstream 2070734 5158384 ~ 5221021 (-)
G90502 NA other upstream 2134823 5222473 ~ 5223047 (-)
G90715 fat4,LOC106611628,LOC106604622 other upstream 3299602 6387252 ~ 6389038 (-)
G90746 NA other upstream 3645585 6733235 ~ 7188648 (-)

Expression


Co-expression Network