AMCG00017435


Basic Information

Item Value
gene id AMCG00017435
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 4242448 ~ 4270086 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017435
GACCTGCTGTTGCAGATGGAAGGTGTTTTTCAAGCATTTCTACTTAGAATCTTATTATCCTGGACAGATGGATTAGATTTTGAATTGCTGATCTCAATGCCTGCCAGATCATCTCCATTCATAATGGGAAGAATTGGAGCTGGTGCCTTAATTGCCATCGATGAAGTAAACAGGAGCCCTAGCCTATTAAAAGAGGACTACCTGGAGGACCCCGCAGTTGTAGGCTTTACAGAGGAGTGGTGGGGCGGCCCAAGAGAGCGCCCCGCCCCCTCTGTGCTTAGAATCTGTGAAAACTTTGGCTGGAGACGCATTGGCATCATCTATGAAAACAAGGCCACCTGGACAATCCCGGCAGAAGGGATTAAATTTGCTGCTGAGCAACACAACATTACAGTGGCAATTTATAGAGATATTCATGGCTACAACACCTCTTTTACATCAAAAAGAGTTATTGAGGAAGTGACTGCTGTGTCACGCAtAATTGTAATATCAGCGAAAGGAGAAGCAGTGAGAGAATTGCTAATTGAAGCCCACAAACAAGGTTTAATCAATGGagagtttgtatttttctgctttGAGCCTTATGAACAGAAAGTAATGTTCGGTGTTTTTCACTGGAAAAGAGGAGATGCTCATGATACAGTAGCAAGAGAAGCATATCAAGCTCTGTTTCTGCTGTCCCTGTATAAACCCCACAATGAAGAGTACATGAACTTTTCAGCTGAGGTCATACGAAGATCTAAAGAAGATTTTGGATACACTTATGCACCGGATGAAACGGTTTCTGTTCTGACTGCAATTTCCCATGATTCTGTGTGGCTGTATGCACAGGCATTAAACGAAACCCTGTCTGAAAACGGTGATCCATATAATGGGTCTGCCATTACGCGTAAAATGTGGAATAGAACAATCACAGGGATTCAGGGTGAAGTTACAATAGATAACAATGGAGACCGTGAATCTGCATACACGATGTATCAcatacaacacaataaaaatggCACATTTGAGGCTATAGCAAATTATCTTGGAACACAGAAAACCTATGTGCAAGTTCCAGGACTCAGCATTGTTTGGCCTGGAGGAAGGACTACTGCCCCACTTGACAGTCCTgaAAACACCTGTTCTGTGCGCTTCCTGCATGCAAAAACTGTTAATCTCAATAAGGAATTACTTTCTGAGCTGAAGCAGTGCAGAGATTTGAACCATCCCAACATATGCAGCTTCATTGGTGCCTGTATAGATCCACCTCACCTCTGCCTGCTGACCGAATATTGCCCCAAAGGGAGTTTGCAGGTGCTGTTTCTGACAttgacagtgttttatttaaggtGCATCTcctctttcagttttgtttgcataatcaaattaaatgtttactggTTTTCACAGGATATTTTGAAGAATGATTCCATAAAGCTTGACTGGACCtttaaatattctttaatgttggACATAGTGAAGGGAATGGACTATCTTCACAAGAGTCCTCTAAGGTCACATGGACACCTTTCATCTACAAACTGTGTGGTAGACAGCAGGTTTGTATTAAAGATCACAGACTTTGGACTGAGCAACCTCAGACGGCCCAATGCTGTTGACGTCCAAAGCAGTCTTGAACACTGGCAGCGTTTACTGTGGAGAGCACCTGAGCTGTTAAGGGACAACATGCCTCCTAATGGAACACAAAAAGGAGATGTTTACAGTTTTGGCATCATAGTCCATGAGATTGTGTATCGCAGTGATGTGTTTTTCATCCCACATTGCACCCCGAGTATAAAGGAGATTATAGCGGAGGTGAAGGCGGGAGGTTGCATTCCCCTCCGGCCCCATTGTGGCACAGCGGAGTGCCCTGAGAATGTGGAGATGCTGATGAAGagctgctggagagagagaccttCAGAGAGACCAGACTTTGTGTCCTTGAAAGTAGTAGTGAAGAAGTTAAGCCCTTCCACGGGGGGGGACAACATTCTTGACAACTTGTTGTCCCGCATGGAGCACTATGCCAAAAACCTGGAGGAGATTGTGAATGAGCGCACCGCCCAGCtcctggaagaaaaaaagaaggcaGAAAGTCTGTTAACTCAGATGTTGCCAAGATCTGTAGCCATCCAGCTGATAGCTGGGGAGACAGTGCAAGCAGAAACATACGACTGTGTGACTATCTATTTCAGTGACATAGTGGATTTTACTGCAATGTCTGCATGCATCACCCCAATGCAGGTTGTTGACTTGCTTAATGACTTGTACACATACTTTGACAATATAATCGACAACCATGATGTTTACAAGGTGGAAACCATAGGTGATGCCTATATGGTGGTATCTGGGCTGCCTATTAGAAATGGGGATGACCATGCAAAAGAAATAGCCAGGATGTCCTTGTCAATACTGCAAGCTATGAGAAAATTTGAAAACAGACATGTCCCAGGTCAGCAGCTAAAGGTCAGAATAGGACTCCATTCAGGCCCCTGTGTAGCAGGCGTTGTAGGGTTGAAAATGCCTCGGTATTGTCTGTTTGGAGACACAGTTAACACTGCCTCACGTATGGAGTCCTATGGTTCACCTCTCAAGATTCACATCAGCAGCTTGACCAAAGAACTGCTAgataaatttaaaacattcaaatgtgaGCAACGAGGAGATATTCATATGAAG

Function

GO: NA

KEGG:

id description
K12323 ANPRA, NPR1; atrial natriuretic peptide receptor A

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017435 True 2661 mRNA 0.44 20 4242448 4270086

Neighbor

gene id symbol gene type direction distance location
AMCG00017436 NA coding downstream 38187 4203686 ~ 4204261 (-)
AMCG00017438 NA coding downstream 333236 3908513 ~ 3909212 (-)
AMCG00017437 NA coding downstream 333960 3907452 ~ 3908488 (-)
AMCG00017432 ctnna2,LOC107552348,LOC103137937,LOC107706127 coding downstream 442976 3776494 ~ 3799472 (-)
AMCG00017434 ctnna2,ctnna1,LOC107594905,LOC107750356 coding downstream 494605 3737813 ~ 3747843 (-)
AMCG00017433 smox,LOC102778491 coding upstream 11398 4281484 ~ 4299779 (-)
AMCG00017442 fbxo41 coding upstream 140796 4410882 ~ 4439595 (-)
AMCG00017444 NA coding upstream 190433 4460519 ~ 4461277 (-)
AMCG00017440 LOC107734701 coding upstream 240333 4510419 ~ 4512209 (-)
AMCG00017441 NA coding upstream 267885 4537971 ~ 4550882 (-)
G90307 NA non-coding downstream 39641 4202607 ~ 4202807 (-)
G90289 NA non-coding downstream 200554 4041687 ~ 4041894 (-)
G90287 NA non-coding downstream 287312 3954888 ~ 3955136 (-)
G90281 NA non-coding downstream 557234 3672295 ~ 3685214 (-)
G90255 LOC100846954 non-coding downstream 837682 3404486 ~ 3404766 (-)
G90354 NA non-coding upstream 76900 4346986 ~ 4347291 (-)
G90355 NA non-coding upstream 78008 4348094 ~ 4348312 (-)
G90345 NA non-coding upstream 114497 4384583 ~ 4390490 (-)
G90411 NA non-coding upstream 392750 4662836 ~ 4665167 (-)
G90443 NA non-coding upstream 659300 4929386 ~ 4937166 (-)
AMCG00017426 NA other downstream 1400554 2711302 ~ 2841894 (-)
AMCG00017418 NA other downstream 1626886 2601783 ~ 2615562 (-)
AMCG00017384 LOC106911887,LOC104963986 other downstream 3890662 160054 ~ 351786 (-)
G89804 NA other downstream 4136563 105685 ~ 105885 (-)
G90400 NA other upstream 272689 4542775 ~ 4544760 (-)
G90501 NA other upstream 888298 5158384 ~ 5221021 (-)
G90502 NA other upstream 952387 5222473 ~ 5223047 (-)
G90715 fat4,LOC106611628,LOC106604622 other upstream 2117166 6387252 ~ 6389038 (-)
G90746 NA other upstream 2463149 6733235 ~ 7188648 (-)

Expression


Co-expression Network