AMCG00017437



Basic Information


Item Value
gene id AMCG00017437
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 3907452 ~ 3908488 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00017437
ATGAAAGAACTATGCCCGGAGTCTCTGTTCGTCCACTGTGCCAACCACTCACTTGACTTAGTTCTTCAAGAGGCCGCCTGTGAGCGTGTATGTAGGGCCTACAGAGAAATCATTGGAACTATGGAGCAGCTTAAAGATGACAAAGGTGTGAGGGGAGACGCTACAGCTAAGATCGGAGGCCTGTATAAGCAAGCAATGAAAGCTAAAACCTACTTTGGCCTCCTGTGTAGCGAAGCACTTTTCGAGCCGTGCGAGTCGGTGGCCAGGAGTTTACAGAACCCCAAAGCCAGCGCACTGGGTGCCCTTAAGTGTACCGAATTTCTTAGAAAGTGCATGGAAGCACTTCGAAATGATGCAGTGGTGGAGAACATACTACACATGGTATCCACAGCGGGACTGAAAATGCCAGGTGATGCTGAGTTGCACAGGATGACAAAAATCCCAGTCCCTTATCGGCACACAACAGAGCCAGAGGCAGAAGTGCAACACCCACGGCGACACAAGTTTTTTGAAGCATTGGACTTGGTCACAGAGGAACTAAAGAGGAGGTTCGATCAAGATGACATGAAAACAGCAGTTCTCAGAGAGAAGGTGGTTAATACGGCAGCCAACAAGGAACAAACAGTGAATGTAGATTCCCTTCACCTTCCCTTGCACTTTGACGGAGCCCGACTGGAGATCCAGCTGAAAATGCTCGGAGACATCTTCAGCGATTCTCCTTGTAACACCGTAAAAGACATAGCCGCAAGTCTAAGCTCCATCCACAAACTAGGGCTATTTTCAAAGAAGCTAAAAACCTCATTAAACTATGCCTATGTCTCCCCATCTCAGTTGCTTCATCTGAGAGAACATTTTCCACTCTGCGCCGTCTAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00017437 True 873 mRNA 0.48 2 3907452 3908488

Neighbor


gene id symbol gene type direction distance location
AMCG00017432 ctnna2,LOC107552348,LOC103137937,LOC107706127 coding downstream 107980 3776494 ~ 3799472 (-)
AMCG00017434 ctnna2,ctnna1,LOC107594905,LOC107750356 coding downstream 159609 3737813 ~ 3747843 (-)
AMCG00017431 ctnna2,LOC102793143,LOC107706127,LOC103137875 coding downstream 368056 3529683 ~ 3539396 (-)
AMCG00017430 ctnna2 coding downstream 419927 3429621 ~ 3487525 (-)
AMCG00017425 NA coding downstream 819802 2841922 ~ 3087650 (-)
AMCG00017438 NA coding upstream 25 3908513 ~ 3909212 (-)
AMCG00017436 NA coding upstream 295198 4203686 ~ 4204261 (-)
AMCG00017435 NA coding upstream 333960 4242448 ~ 4270086 (-)
AMCG00017433 smox,LOC102778491 coding upstream 372996 4281484 ~ 4299779 (-)
AMCG00017442 fbxo41 coding upstream 502394 4410882 ~ 4439595 (-)
G90281 NA non-coding downstream 222238 3672295 ~ 3685214 (-)
G90255 LOC100846954 non-coding downstream 502686 3404486 ~ 3404766 (-)
G90252 NA non-coding downstream 551963 3355065 ~ 3355489 (-)
G90244 NA non-coding downstream 967309 2939935 ~ 2940143 (-)
G90243 NA non-coding downstream 967975 2939250 ~ 2939477 (-)
G90287 NA non-coding upstream 46400 3954888 ~ 3955136 (-)
G90289 NA non-coding upstream 133199 4041687 ~ 4041894 (-)
G90307 NA non-coding upstream 294119 4202607 ~ 4202807 (-)
G90354 NA non-coding upstream 438498 4346986 ~ 4347291 (-)
G90355 NA non-coding upstream 439606 4348094 ~ 4348312 (-)
AMCG00017426 NA other downstream 1065558 2711302 ~ 2841894 (-)
AMCG00017418 NA other downstream 1291890 2601783 ~ 2615562 (-)
AMCG00017384 LOC106911887,LOC104963986 other downstream 3555666 160054 ~ 351786 (-)
G89804 NA other downstream 3801567 105685 ~ 105885 (-)
G90400 NA other upstream 634287 4542775 ~ 4544760 (-)
G90501 NA other upstream 1249896 5158384 ~ 5221021 (-)
G90502 NA other upstream 1313985 5222473 ~ 5223047 (-)
G90715 fat4,LOC106611628,LOC106604622 other upstream 2478764 6387252 ~ 6389038 (-)
G90746 NA other upstream 2824747 6733235 ~ 7188648 (-)

Expression



Co-expression Network