AMCG00017444



Basic Information


Item Value
gene id AMCG00017444
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 4460519 ~ 4461277 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00017444
ATGGCCTCTCTGGACCTGCCTTACCGCTGTCCGCGTTGCGGGGAACACAAACGTTTCCGGAGCCTGTCATCCCTGAGAGCTCACCTGGAGTACAACCACACCTACGAGACCCTCTACGTCCTTTCCAAGTCCAACAGCGTTTGTGACGCCACCCTCGTTCCCTTGGTGACTGACGGGCCACTGCTGAGCCCCGTGGGCGGCCGTAAAGACGTATTTGAGAGCACCTCCTTCAGTGCCAAGGAACACCGCTACCCCTACGACTTGCCATGTGCTGAGGACCTGGGACTGACCGCTGCTGCTGCCCGCTATATCCCCAATGTAGAAATCCCCCTGAGCGAGATCTTCATCAAGAAAGGCATGAcctccaccaccccccccacgTCCACCTCCTCCGCAGTCGCAGCTGCTGCCACCGCCGCCGCCAACGCTGTGGAGGCCGCCTACGAGGAAGGGCTGGCCCGACTGAAGGTCCGGGCATTCGAGAAGCTGGAGCTGGACGAGCGGCTCGAGAAGCTCTCTGAGGAGGTGGAGCAGAAGATAGCGGCCCGCGTGGGTCGGCTGCAAGTGGAGCTGGAGAAGAAGAGCACCGAGCTGGAGAAGGCCAAGCAGGAGAGCGTGCGTCTCAGCCAGGAGAAGCAAGACCTGGAGGACAAGGCCTCGGAGCTGTCCCGCCAGGTGGACGTGTCTGTGGAGATGCTGGCCACCCTGAAGCAGGACCTGGTCAACAAGGAGCAGGAACTCAACTGCAAGCAGCAGTGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00017444 True 759 mRNA 0.62 1 4460519 4461277

Neighbor


gene id symbol gene type direction distance location
AMCG00017442 fbxo41 coding downstream 20924 4410882 ~ 4439595 (-)
AMCG00017433 smox,LOC102778491 coding downstream 160740 4281484 ~ 4299779 (-)
AMCG00017435 NA coding downstream 190433 4242448 ~ 4270086 (-)
AMCG00017436 NA coding downstream 256258 4203686 ~ 4204261 (-)
AMCG00017438 NA coding downstream 551307 3908513 ~ 3909212 (-)
AMCG00017440 LOC107734701 coding upstream 49142 4510419 ~ 4512209 (-)
AMCG00017441 NA coding upstream 76694 4537971 ~ 4550882 (-)
AMCG00017443 LOC107700321,LOC107757625,LOC107695387,LOC107595047,LOC107714648 coding upstream 97628 4558905 ~ 4584957 (-)
AMCG00017447 LOC106608414,LOC107396729 coding upstream 140227 4601504 ~ 4620068 (-)
AMCG00017448 nelfa,LOC100380775 coding upstream 182419 4643696 ~ 4661158 (-)
G90345 NA non-coding downstream 70029 4384583 ~ 4390490 (-)
G90355 NA non-coding downstream 112207 4348094 ~ 4348312 (-)
G90354 NA non-coding downstream 113228 4346986 ~ 4347291 (-)
G90307 NA non-coding downstream 257712 4202607 ~ 4202807 (-)
G90289 NA non-coding downstream 418625 4041687 ~ 4041894 (-)
G90411 NA non-coding upstream 201559 4662836 ~ 4665167 (-)
G90443 NA non-coding upstream 468109 4929386 ~ 4937166 (-)
G90520 NA non-coding upstream 794812 5256089 ~ 5256406 (-)
G90540 NA non-coding upstream 893985 5355262 ~ 5356316 (-)
G90648 NA non-coding upstream 1215622 5676899 ~ 5677249 (-)
AMCG00017426 NA other downstream 1618625 2711302 ~ 2841894 (-)
AMCG00017418 NA other downstream 1844957 2601783 ~ 2615562 (-)
AMCG00017384 LOC106911887,LOC104963986 other downstream 4108733 160054 ~ 351786 (-)
G89804 NA other downstream 4354634 105685 ~ 105885 (-)
G90400 NA other upstream 81498 4542775 ~ 4544760 (-)
G90501 NA other upstream 697107 5158384 ~ 5221021 (-)
G90502 NA other upstream 761196 5222473 ~ 5223047 (-)
G90715 fat4,LOC106611628,LOC106604622 other upstream 1925975 6387252 ~ 6389038 (-)
G90746 NA other upstream 2271958 6733235 ~ 7188648 (-)

Expression



Co-expression Network