AMCG00017449


Basic Information

Item Value
gene id AMCG00017449
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 4628215 ~ 4633610 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017449
ATGGTGGACTCCAGCGATGCGGCGCACATCCAGGAGACCAAGGCCGCAGTGCTGAGACACCCGCGCATCACTGGGAAGACCGTGCTGCTGCTGGTCAATAAGCAGGACTGCAATGGAGCCTTGTACGAGGGAGAGCTTGTCGAGTCCCTCTCTCTGGACAAGCTGGTGAACCAGCACAAGTTGGTGTTCATTAGTGCAGCTCCAGCAGGGAGAGCAGCACTGAGGACAGCACTGCGATCTGATATCAATCCAGGACAGGGACATCAGGCTGAAGGGAGTCCTAGAGCTCACACTGGCAGCTACCTGGATGTATTGAGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017449 True 321 mRNA 0.57 2 4628215 4633610

Neighbor

gene id symbol gene type direction distance location
AMCG00017439 rnf24,LOC107689472 coding upstream 243468 4383332 ~ 4384747 (+)
AMCG00017429 NA coding upstream 428761 4189248 ~ 4199454 (+)
AMCG00017428 lrrtm1,LOC107706126,LOC107551676,LOC107689474,LOC107558618,LOC107711523 coding upstream 1059495 3567260 ~ 3568720 (+)
AMCG00017427 NA coding upstream 1146493 3275663 ~ 3481722 (+)
AMCG00017423 suclg1,LOC107674246,LOC106602756 coding upstream 1901388 2713157 ~ 2726827 (+)
AMCG00017450 NA coding downstream 56268 4689878 ~ 4691955 (+)
AMCG00017451 NA coding downstream 227764 4861374 ~ 4868470 (+)
AMCG00017454 NA coding downstream 251351 4884961 ~ 4900663 (+)
AMCG00017457 NA coding downstream 375571 5009181 ~ 5048242 (+)
AMCG00017456 NA coding downstream 598858 5232468 ~ 5272687 (+)
G90338 NA non-coding upstream 237674 4385241 ~ 4390541 (+)
G90337 NA non-coding upstream 297632 4330370 ~ 4330583 (+)
G90333 NA non-coding upstream 315740 4312258 ~ 4312475 (+)
G90284 NA non-coding upstream 730090 3897818 ~ 3898125 (+)
G90248 NA non-coding upstream 1390489 3237445 ~ 3237726 (+)
G90413 NA non-coding downstream 64328 4697938 ~ 4710074 (+)
G90436 NA non-coding downstream 267412 4901022 ~ 4910792 (+)
G90475 LOC104962440 non-coding downstream 454983 5088593 ~ 5098887 (+)
G90477 NA non-coding downstream 458058 5091668 ~ 5222752 (+)
G90551 NA non-coding downstream 771832 5405442 ~ 5407529 (+)
AMCG00017445 NA other upstream 21644 4592802 ~ 4606571 (+)
AMCG00017422 leprotl1,LOC103152176 other upstream 1932762 2687420 ~ 2695453 (+)
AMCG00017388 LOC108267694,LOC106608525 other upstream 4416279 207586 ~ 211936 (+)
AMCG00017386 dctn1,LOC101464740 other upstream 4529818 48007 ~ 98397 (+)
AMCG00017446 NA other downstream 29015 4662625 ~ 4688223 (+)
AMCG00017486 NA other downstream 2096128 6729738 ~ 7188643 (+)
G90877 NA other downstream 3034573 7668183 ~ 7671850 (+)
G90881 NA other downstream 3058975 7692585 ~ 7693347 (+)
AMCG00017508 NA other downstream 3172768 7806378 ~ 7813639 (+)

Expression


Co-expression Network