AMCG00017451


Basic Information

Item Value
gene id AMCG00017451
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 4861374 ~ 4868470 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017451
ATGATCCTCTTGCACAGAGTCCGGACATCATTCTTCGGAGTAGCGCTCAGTGACACACTCTCGATCAGTACAATGGGGAACTGCCGCAGCCACCCCACAAGGAAAGTGACTTTGGTGATGGTGGGACTGGATAAGGCAGGAAAAACGACGACTCTGAGAAGCATTCAGGGGCAAAATCCAGAAGACTTGGCCCTCACAGTGGGCTTCTCCAAAATCGCCCTGAAGCAGGGGGACTCTGAGGAGACCAAGGCCGCCATGGCCGCGGTGCTGAGACACCCGCGCATCGCCGGGAAGCCCTTGCTGCTGCTCGCCAATAAGCAGGACTGCGACGGAGCCTTGTATGAGGGAGAGCTCGTCGAGTCCCTCTCTCTGGACAAGCTGGTGAACCAGCACAAGTGTCGCTGTAAAATCGAACCATGCTCGGCCGCGATGGACAACGGCATGAACCGGGAGCACCCCGTCAAGAGGGGGCTGGGCTGGCTGCTGAGCAGCATCGCCGACGACTACACAGCCGAGCAGAGAGCCCTGGAGGAGCAGGACCAGCGCCAGAGAGCGGAGCGAGTGCGCCGTGTCCGAGAGGGAGGAGGCCGGGCGAGAGGGCAGGCCCGCaccggaggaggaggagccggCGGAGGACAGCCCCTGTCAAACCCCTTTCAGCCCATCGCTGAGACCCAGGACAGTCGGAGGAGGGACAAGAAGCCTAGCCATTTCCCCTGGCTCCGGGGCTGGCGCAGGGCATGCCCAGTGACGACGCGGGTGGTGGAGGAGCGCAGGCCCCGGGAGCGCCACAGCATGGCCAACCTGGACAGTCCCCACCTGAGGGCCACTCATCCTGATGGAAGACaaaggaaggaggaagaggactgTGAAAGGCTGCAGACTGTGGCTGGAGAAAGAAGGCCTCGGACAGCTGCACTAGCCACTGGTGCATTACTGCTGGAGGTTGTGCACCTGTGTGTTTCTGAGCAGCTGGAGGCTCTCAGTGGAGACAGTGCGACGTCACATTACCCTAGAGACAGGACCACTCAGCCACTTCCGATGCTGCAGACACGCTCACTGAGCACGATTTTGCATGACTATGAGTATCAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017451 True 1095 mRNA 0.61 4 4861374 4868470

Neighbor

gene id symbol gene type direction distance location
AMCG00017450 NA coding upstream 169419 4689878 ~ 4691955 (+)
AMCG00017449 NA coding upstream 227764 4628215 ~ 4633610 (+)
AMCG00017439 rnf24,LOC107689472 coding upstream 476627 4383332 ~ 4384747 (+)
AMCG00017429 NA coding upstream 661920 4189248 ~ 4199454 (+)
AMCG00017428 lrrtm1,LOC107706126,LOC107551676,LOC107689474,LOC107558618,LOC107711523 coding upstream 1292654 3567260 ~ 3568720 (+)
AMCG00017454 NA coding downstream 16491 4884961 ~ 4900663 (+)
AMCG00017457 NA coding downstream 140711 5009181 ~ 5048242 (+)
AMCG00017456 NA coding downstream 363998 5232468 ~ 5272687 (+)
AMCG00017464 NA coding downstream 462286 5330756 ~ 5351825 (+)
AMCG00017463 NA coding downstream 487292 5355762 ~ 5370642 (+)
G90413 NA non-coding upstream 151300 4697938 ~ 4710074 (+)
G90338 NA non-coding upstream 470833 4385241 ~ 4390541 (+)
G90337 NA non-coding upstream 530791 4330370 ~ 4330583 (+)
G90333 NA non-coding upstream 548899 4312258 ~ 4312475 (+)
G90284 NA non-coding upstream 963249 3897818 ~ 3898125 (+)
G90436 NA non-coding downstream 32552 4901022 ~ 4910792 (+)
G90475 LOC104962440 non-coding downstream 220123 5088593 ~ 5098887 (+)
G90477 NA non-coding downstream 223198 5091668 ~ 5222752 (+)
G90551 NA non-coding downstream 536972 5405442 ~ 5407529 (+)
G90552 NA non-coding downstream 539178 5407648 ~ 5412689 (+)
AMCG00017446 NA other upstream 173151 4662625 ~ 4688223 (+)
AMCG00017445 NA other upstream 254803 4592802 ~ 4606571 (+)
AMCG00017422 leprotl1,LOC103152176 other upstream 2165921 2687420 ~ 2695453 (+)
AMCG00017388 LOC108267694,LOC106608525 other upstream 4649438 207586 ~ 211936 (+)
AMCG00017386 dctn1,LOC101464740 other upstream 4762977 48007 ~ 98397 (+)
AMCG00017486 NA other downstream 1861268 6729738 ~ 7188643 (+)
G90877 NA other downstream 2799713 7668183 ~ 7671850 (+)
G90881 NA other downstream 2824115 7692585 ~ 7693347 (+)
AMCG00017508 NA other downstream 2937908 7806378 ~ 7813639 (+)
G90955 NA other downstream 3263898 8132368 ~ 8132854 (+)

Expression


Co-expression Network