AMCG00017452


Basic Information

Item Value
gene id AMCG00017452
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 4876511 ~ 4884349 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017452
CTCTACTATAAACCTCGGCAGTGTGGTGTAAAGTTTGAAACAAGCAGAGGTGTGGATACGGTTGTGAAAATATTCTTAACTTGAGTTAATACACTACCGATTACATAAGGTAAGAGATTGTTTATTGTAACTGTGTggcgataaataaataaatataggtgTGCACAACTCGCTACTGATGTAATTTAACTGTTGCTTTCTTAAAACGAGTGTTTACAATCGGCACGTTGTTTTCTCGGcctattattaatttattgtgtgtatttcgTGGTTGCGGACGTACGTTTTGAAAACTATTCAGGGGATGGGAAAAGTCCTAGTATGTGGAAAGTTTGTTTAATCAGATTCTGTGTTTTGCTGTTTATGTCTTCGCGCCGTTTTTGTAGCCAATGAGAACCGTGAAGTATGAAGGCTGGAAATGAAATGACAGACCGTGTCGCTGCGGGGACGACAGCTGCGCCCGCCTCTCTATTCGCTGCTTGAGCAACCTGCTGCTCTCAAACATGACACGAGTGATCACTGCCCTGGATATAGATCTGTAATCGCAGGACACTGCCTCTCAATCAGTTTTCAATAAACATGTTTCTAAAGCATGGGCACAGTACATTTCTCAAATATTGCATGGgtgcataaaatatttactatagctttatagtatagtatttttATGCCACCTATTATCTTCTGAATAGGGGAATTCTCACGTTTCCACGCTGTTAGTGCCTACCTAATGAAAGGGCAGAGATTAGGAGTAACATTTCTCTAAAGTTCTCCATTATAGGTGTGCAGTCGTTTTACATGAATCATAAAATTGATCCCCTCTTCTTTCATCTCGGGTATTTGTGTACATTAAAATTATGATGTTAAACCAAAAGAGCACATGGCCTCATATTTCCTGATCATTAACAAACCCATAAAGAAATAATTGTTCATAAAATTTAAAGCTTCAGCTTCTTGAGAGGTAACACCAGAGCGAGGCGAAATGAACGACGGGAGTCAGTTTGTGGAGACCCTGAAGAAGCTGAACTACCCCAAGGCCTCCGAGCTGAAGGGGGAGGATTTCGACTGGCTCTTCGAGTCCCCTGAGCACAGGTGCTTCCTGCGCTGGTTCTGCAGCAGCGTGAACAAGGAGAACGTCTTGAGTGAGGAGGAGGTGACGGCTTTCCAGGCACTCAGGGAATTAGGCAAACCTATCCTGGATGAGGCTGCGCTGGTGGATGTGCTGAAGACCTGCCAGAGTGAGGAGCCCCGCAGGGACCTGGCCTTTCTGGAGGAGCTGGGGGtggagcagctggaggaggagctgcaggcGCTGCGCagggagaagaagaggaagatgCAGAGGCTCAGGAGGCTGCAGGTGATGACCACAGCCAGTGCTGACACTGCCCTCCGGCTCACCTCTCAGGAGAAGGAGGCCTCTGTGGCACTCAGGGAGACTGTGGAGGCCTTGGGGGCAGAGAATGCCAAGACCAACCATGACCTGCAGATCCTTGAGGAAGAGGTGAAGAAGCTGACAACCTTCTTCTCCCCTGGTGCTGAGCAGGAGGCTGGAACACAGAGCCAGCCACCTGTCTTCCTCTCCCAGCTGCCTCTGGAGACCTATTTGCATCAGGAGGAGCTCAACACCAAGGCTCTGACCTCATTCACACAGAAGCAGTTCTTCCAGGGCATCTCAGACCTGGTGGAGAGCTCCAACGAGGAGAACTTCCGGCTCTTGGACCTCAGCAGCAGCTCGGCTGGCAGAGAGGACGGTCAGGTTCAGCAGGGCCACAGGAAGGAGATGGCCAGGCTGCAGTGTGCCCACAGCATGGCCCAGTACCAGCTGATCCAGGCCACAGCCCAAGAGCACAGCATCAGGGCTGGACTGCAGTGGATTGACGCCAACGCCAGTACAAAGTTGAGCGGCTCAGTGCAGGATCTGGAGGTGCGAGCTGCCAGGCTCAGGAAGGAGCTTGAGGCTGTGCAGAGCCAGGTGCAGACTTTGCAGAGTGAGCAGCTACCAGCTGCAGTCCGGGAGAGCGCCCAGCTCCTCAACGTGCCCGTGGTCAGAGGAGACATTGACCTGCAGATCGCCCGGCAGGACTATTACACCTCCAGGCAGGACGAGGTGTGCTGCCACCTGCTGAGGCAGAAGGCCTCCTTTGACCTGCTGCAGCTGGGCTACGAGCTGGAACTCAAGCAGGACAAGGAGCTCCACAAACAGCTGGAAGACCTGGTCCAGCACCTGGAGAGTAGGTGCAATAACCTCTCTCGGCGCTTAGAGACCTTCTCCAGCCCAGAGCTGGCTGTTAGTGTGCAGCCCCGCAGCATAATTCACTCCAAGGACACAGTTCTCTGCAGGCTGTACCAGGCTCTGGAGGGGAAGGCGACGCAGGAGCAGCCTTTCAGGACGTATGAGGGTCTGCAGCAGGCCGCCCTGGCTCTACAGCAGGAGCTCCAGTCTGTGAGGGAGGCCATCGCCAGTGCTGAGCAGGAGCAGGCTTACAGCATGGCCAAGATGGAGGCCGACTCGGATGTGCTACGCAGCACAAACTACTGTGGGCTAAAGCAGCTGGTGCTTACTCCACAGGAGCTGGGAGAGAGACTGCTGCACCTGGAGGCCCAGCTGAATAAGCTCAATCAGCTCATGCAGGAAATCGGCAATGACATCAGGACTAAGAAGAGCATCCTGGAACGCAAGAAGCTCCTGCGCAAGGAGCGCAAGCTTTACGACTACTTCTTCCAGGACGAGGATTACCTCAAGAGCACTATCAGAGATCTGGAGGATAAGGTCAGGGCTGTCACCATTGGCCAGGCAGACTGACAGCACAGGGGACTGCCTACTTTTGCACAAGTGGAAGCCTGCCTGTGGGGATTGGCTCAGCTGACATTGTCATGCGATTGCCAGGAGGATTGGAAACTTGAGCTGTGGAGCTCACCCCAGGACGGATGGCCGAGGCTCGTTTCCGCTCATCTCCTGGGCAGGTTACCTTATGCCTGCTGTTCCTGGGTCTACCAGCCAGCTGGAGAGGAGCAGGAGGGAATCTGCTGAacttctgggaaaaaaaagttgaaactTAAGGCTATAACTTAAATCCTTTTCTGGCTATAATTAACATCATCCAAaggcaaaattatattttcacagtgAGCATCATCTATTGAACACTTAAACATTTAGAGGATATGAATCCTTTGCCATTCtgtacatcaaataaaaaaatcctggCTGAAGGGGACCTCTTGTGGTCAGTTTGGGTGACTACGTACTGTAAAACTATTCCACTGACTACTTTGGATGGTGGATGGTGTTTGATTAGCACAAAAGTTTATTAGCCATGATTCTTTGCTTTGgttatttttcatgttgtgtTAAGAATGTCTAAAATGCTTTGGGAAACCCAGTGTGTGGCTATCAGATATCTGTGTTAGATGGATTACACTCCCTTGGCTACCCTTTTATCTagaacattaacaatgtctcaAATAAAGTTGTAAACCCTTGTTTTTCAGCTTCACTTGAAACCTTTTATATCTCGTTGTAAATCCACTTCATATACTTGATTGTGCTTCATTGAAACCCCTCCAGATGAGTGTGAATGCTAATCCAGGGGGGCATGTTCCCAtgtgcagggagagagagagagagagagagagtcaggaCAA

Function

GO: NA

KEGG:

id description
K16586 HAUS3; HAUS augmin-like complex subunit 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017452 True 3648 mRNA 0.50 4 4876511 4884349

Neighbor

gene id symbol gene type direction distance location
AMCG00017453 NA coding downstream 14534 4692133 ~ 4861977 (-)
AMCG00017448 nelfa,LOC100380775 coding downstream 215353 4643696 ~ 4661158 (-)
AMCG00017447 LOC106608414,LOC107396729 coding downstream 256443 4601504 ~ 4620068 (-)
AMCG00017443 LOC107700321,LOC107757625,LOC107695387,LOC107595047,LOC107714648 coding downstream 291554 4558905 ~ 4584957 (-)
AMCG00017441 NA coding downstream 325629 4537971 ~ 4550882 (-)
AMCG00017455 mxd4,LOC107757594,LOC107700283 coding upstream 22465 4906814 ~ 4914079 (-)
AMCG00017460 NA coding upstream 86059 4970408 ~ 5010102 (-)
AMCG00017458 NA coding upstream 167943 5052292 ~ 5067312 (-)
AMCG00017459 NA coding upstream 324584 5208933 ~ 5209817 (-)
AMCG00017466 NA coding upstream 520495 5404844 ~ 5425674 (-)
G90411 NA non-coding downstream 211344 4662836 ~ 4665167 (-)
G90345 NA non-coding downstream 486021 4384583 ~ 4390490 (-)
G90355 NA non-coding downstream 528199 4348094 ~ 4348312 (-)
G90354 NA non-coding downstream 529220 4346986 ~ 4347291 (-)
G90307 NA non-coding downstream 673704 4202607 ~ 4202807 (-)
G90443 NA non-coding upstream 45037 4929386 ~ 4937166 (-)
G90520 NA non-coding upstream 371740 5256089 ~ 5256406 (-)
G90540 NA non-coding upstream 470913 5355262 ~ 5356316 (-)
G90648 NA non-coding upstream 792550 5676899 ~ 5677249 (-)
G90670 NA non-coding upstream 895531 5779880 ~ 5780526 (-)
G90400 NA other downstream 331751 4542775 ~ 4544760 (-)
AMCG00017426 NA other downstream 2034617 2711302 ~ 2841894 (-)
AMCG00017418 NA other downstream 2260949 2601783 ~ 2615562 (-)
AMCG00017384 LOC106911887,LOC104963986 other downstream 4524725 160054 ~ 351786 (-)
G89804 NA other downstream 4770626 105685 ~ 105885 (-)
G90501 NA other upstream 274035 5158384 ~ 5221021 (-)
G90502 NA other upstream 338124 5222473 ~ 5223047 (-)
G90715 fat4,LOC106611628,LOC106604622 other upstream 1502903 6387252 ~ 6389038 (-)
G90746 NA other upstream 1848886 6733235 ~ 7188648 (-)
G90749 NA other upstream 2228087 7112436 ~ 7113181 (-)

Expression


Co-expression Network