AMCG00017455 (mxd4,LOC107757594,LOC107700283)


Basic Information

Item Value
gene id AMCG00017455
gene name mxd4,LOC107757594,LOC107700283
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 4906814 ~ 4914079 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017455
ATGACGGCACCCATGACGGGACCTCTGTGCCTTATCCCACCAAACTGACGTGCCAAACTGCGTCTCTATCTGGAGCAGCTGAAGCAGCTGGTGCCCCTGGGTCCAGACAGCACTAGACACACCACCCTGAGCCTCCTCAAAAGAGCCAAGATGCACATCAAGaaACTGGAGGAGCAGGACCGCAAGGCCGTCAATGTGAAGGAGCAGCTGCAGCGAGAGCACCGCTACCTCAAACGCCGGCTGGAGCAGCTGTCCATCCACGGCCTGGAGAGGATCCGCACAGACAGCATGGGCTCCACCATCTCCACGGACTCTGAGCAAGAGGTGGACATCGAGGGCATGGAGTTCACACCGGGGGAGATGGACAGCATGGGCAGTGTGAGCGACGGCGAAGACCACTACAGCCTGCAGGGCAGCTCCAGCGATGGCAGCTACACACATTCCCTCAGACTGCAGCCCCTCCTGTCCTAG

Function

symbol description
mxd4 Predicted to enable protein dimerization activity. Is expressed in head mesenchyme; notochord; pronephric duct; and pronephric mesoderm. Orthologous to human MXD4 (MAX dimerization protein 4).

NR:

description
PREDICTED: max dimerization protein 4-like isoform X2

GO: NA

KEGG:

id description
K09114 MXD, MAD; MAX dimerization protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017455 True 471 mRNA 0.60 4 4906814 4914079

Neighbor

gene id symbol gene type direction distance location
AMCG00017452 NA coding downstream 22465 4876511 ~ 4884349 (-)
AMCG00017453 NA coding downstream 44837 4692133 ~ 4861977 (-)
AMCG00017448 nelfa,LOC100380775 coding downstream 245656 4643696 ~ 4661158 (-)
AMCG00017447 LOC106608414,LOC107396729 coding downstream 286746 4601504 ~ 4620068 (-)
AMCG00017443 LOC107700321,LOC107757625,LOC107695387,LOC107595047,LOC107714648 coding downstream 321857 4558905 ~ 4584957 (-)
AMCG00017460 NA coding upstream 56329 4970408 ~ 5010102 (-)
AMCG00017458 NA coding upstream 138213 5052292 ~ 5067312 (-)
AMCG00017459 NA coding upstream 294854 5208933 ~ 5209817 (-)
AMCG00017466 NA coding upstream 490765 5404844 ~ 5425674 (-)
AMCG00017467 NA coding upstream 546986 5461065 ~ 5465561 (-)
G90411 NA non-coding downstream 241647 4662836 ~ 4665167 (-)
G90345 NA non-coding downstream 516324 4384583 ~ 4390490 (-)
G90355 NA non-coding downstream 558502 4348094 ~ 4348312 (-)
G90354 NA non-coding downstream 559523 4346986 ~ 4347291 (-)
G90307 NA non-coding downstream 704007 4202607 ~ 4202807 (-)
G90443 NA non-coding upstream 15307 4929386 ~ 4937166 (-)
G90520 NA non-coding upstream 342010 5256089 ~ 5256406 (-)
G90540 NA non-coding upstream 441183 5355262 ~ 5356316 (-)
G90648 NA non-coding upstream 762820 5676899 ~ 5677249 (-)
G90670 NA non-coding upstream 865801 5779880 ~ 5780526 (-)
G90400 NA other downstream 362054 4542775 ~ 4544760 (-)
AMCG00017426 NA other downstream 2064920 2711302 ~ 2841894 (-)
AMCG00017418 NA other downstream 2291252 2601783 ~ 2615562 (-)
AMCG00017384 LOC106911887,LOC104963986 other downstream 4555028 160054 ~ 351786 (-)
G89804 NA other downstream 4800929 105685 ~ 105885 (-)
G90501 NA other upstream 244305 5158384 ~ 5221021 (-)
G90502 NA other upstream 308394 5222473 ~ 5223047 (-)
G90715 fat4,LOC106611628,LOC106604622 other upstream 1473173 6387252 ~ 6389038 (-)
G90746 NA other upstream 1819156 6733235 ~ 7188648 (-)
G90749 NA other upstream 2198357 7112436 ~ 7113181 (-)

Expression


Co-expression Network