AMCG00017462


Basic Information

Item Value
gene id AMCG00017462
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 5373357 ~ 5375454 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017462
GAGAAAGCCTTGCTTAGTTAGCTGAATGCCTTCTTTGTGAAAGGAGGCTATATATAGTGGAGAGAACCAACACTCGGCCCCTTACACTCAGAGGCACTTTGGAAGCTGAACTCCCTTCCACTGCCACCTCAGCCAATATGAAGGCTTGGACCagctctgttttattctttgccTGCTGCCTGTGGGCTGTCAATGGACAGAGCAAGAAAAGCAGTGCGGAAGAGCAATTCCGCTTCAACACCAAGAGCAAAGATGCCTGTGTTATGACAGTGagcggagagggagagatgaagCTCCGGATTGTGTGTAAAAACCAGGGCAAGTCTTACTGGTGTGAGTACACCGGCAAGCCGTCTGTGTGCCGCTCTTTCAACGCCAACCCCAAGCAGTACTGGAACCAGATCAGTATGGAGCGGAGGAAAACTACCAACGCCTGCCAAGGGGCCATGATCCTAAAGCCAAGCATGTGTCAGAAGGCTCCTGTAGATGCGCACATGAAGCAAATAGCTGCTGGCCCTAAGCTGGTTATGCAGAAGCCTACCCAGTCAAAATCAGCAGCTAAAGTAACCCCAGCAAGAAAAACTCCATCCAAACCAACACCAACAACCAGCACTGAGCAAAACGCTGACAGGATGGCACAAGAACATTGCTGGGAATCGCTACACGATGTTTGTGCTTATATCTTCGACTTCTTCCAGGGTTTAAATTGACATCTGGAACATCCAGCAAATCCTGAAGTCTGCTGGTTTTCACAACTTGGATTCAGACTATTTTCTGGATGgtagatttaaaaaatcctgTACGAAGAATTCAAAAGTTCCGactttttacaatttaaaatcttaGAATGTTTTATTCTAGCTGTGAAAGAAATCCATGTCCtgttaattttacaaaacaataatgtctTATGTAACTTGAATTAAACTGTTCTTTTGATTAGTATTTCCTTTTATAATGTGTTGATTGCAGTCCAAGCCAAAGACAGTATGCTcttttgtaatacattataGCAGTGTGGGAGCAGGTACAGATAAAGTTATAGATATAGTTATTCTAATGCACTAACGTTACCTGAAGGTTTACTACATATTCTATTAACTTTAAAATCAATGATATACATGTTTCCTGTGTTTTCTGGATCATATAATTTGAACTGAAACCTGACTTTTGTGACTTGAtgtttttgtgcttcttcagCCAATGCCCTTTCCCCCATCTCTGTCTCTTCTGTAGATTTGTTGTATGACTGTATGaattgttattttgctttttgttattgtaaGGAAGATGTGCCCACCTTAACTGATGCTTAGTGATAAGATTACATTTTGTCTGCCccattcttaaaataaatccatcaagATTGGTGTGTTTATTTCGCATTttcagtgatatatatatatatatatatatatatatatataggtgtaATACAACTACAGTTTAATTCATGAAGAAGCACTGCAAActgtactttaaatatattgattttccaTTCTTCATCTACttattgtgttaaatgttgtctgtgcattttgtgtatagataattatattatataagcGTTAAC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017462 True 1573 mRNA 0.39 2 5373357 5375454

Neighbor

gene id symbol gene type direction distance location
AMCG00017463 NA coding upstream 2715 5355762 ~ 5370642 (+)
AMCG00017464 NA coding upstream 21532 5330756 ~ 5351825 (+)
AMCG00017456 NA coding upstream 100670 5232468 ~ 5272687 (+)
AMCG00017457 NA coding upstream 325115 5009181 ~ 5048242 (+)
AMCG00017454 NA coding upstream 472694 4884961 ~ 4900663 (+)
AMCG00017465 NA coding downstream 3005 5378459 ~ 5379148 (+)
AMCG00017461 exosc9,LOC107746036,LOC101063486 coding downstream 49977 5425431 ~ 5459702 (+)
AMCG00017470 kiaa1109 coding downstream 163058 5538512 ~ 5624154 (+)
AMCG00017471 NA coding downstream 249570 5625024 ~ 5640242 (+)
AMCG00017474 fgf2,LOC106604591,LOC102794353 coding downstream 404426 5779880 ~ 5792505 (+)
G90477 NA non-coding upstream 150605 5091668 ~ 5222752 (+)
G90475 LOC104962440 non-coding upstream 274470 5088593 ~ 5098887 (+)
G90436 NA non-coding upstream 462565 4901022 ~ 4910792 (+)
G90413 NA non-coding upstream 663283 4697938 ~ 4710074 (+)
G90338 NA non-coding upstream 982816 4385241 ~ 4390541 (+)
G90551 NA non-coding downstream 29988 5405442 ~ 5407529 (+)
G90552 NA non-coding downstream 32194 5407648 ~ 5412689 (+)
G90554 NA non-coding downstream 36277 5411731 ~ 5412261 (+)
G90561 NA non-coding downstream 64758 5440212 ~ 5463064 (+)
G90647 NA non-coding downstream 301447 5676901 ~ 5677244 (+)
AMCG00017446 NA other upstream 685134 4662625 ~ 4688223 (+)
AMCG00017445 NA other upstream 766786 4592802 ~ 4606571 (+)
AMCG00017422 leprotl1,LOC103152176 other upstream 2677904 2687420 ~ 2695453 (+)
AMCG00017388 LOC108267694,LOC106608525 other upstream 5161421 207586 ~ 211936 (+)
AMCG00017386 dctn1,LOC101464740 other upstream 5274960 48007 ~ 98397 (+)
AMCG00017486 NA other downstream 1354284 6729738 ~ 7188643 (+)
G90877 NA other downstream 2292729 7668183 ~ 7671850 (+)
G90881 NA other downstream 2317131 7692585 ~ 7693347 (+)
AMCG00017508 NA other downstream 2430924 7806378 ~ 7813639 (+)
G90955 NA other downstream 2756914 8132368 ~ 8132854 (+)

Expression


Co-expression Network