Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017463 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 5355762 ~ 5370642 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0016324 | apical plasma membrane | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017463 | True | 1089 | mRNA | 0.39 | 9 | 5355762 | 5370642 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017464 | NA | coding | upstream | 3937 | 5330756 ~ 5351825 (+) |
| AMCG00017456 | NA | coding | upstream | 83075 | 5232468 ~ 5272687 (+) |
| AMCG00017457 | NA | coding | upstream | 307520 | 5009181 ~ 5048242 (+) |
| AMCG00017454 | NA | coding | upstream | 455099 | 4884961 ~ 4900663 (+) |
| AMCG00017451 | NA | coding | upstream | 487292 | 4861374 ~ 4868470 (+) |
| AMCG00017462 | NA | coding | downstream | 2715 | 5373357 ~ 5375454 (+) |
| AMCG00017465 | NA | coding | downstream | 7817 | 5378459 ~ 5379148 (+) |
| AMCG00017461 | exosc9,LOC107746036,LOC101063486 | coding | downstream | 54789 | 5425431 ~ 5459702 (+) |
| AMCG00017470 | kiaa1109 | coding | downstream | 167870 | 5538512 ~ 5624154 (+) |
| AMCG00017471 | NA | coding | downstream | 254382 | 5625024 ~ 5640242 (+) |
| G90477 | NA | non-coding | upstream | 133010 | 5091668 ~ 5222752 (+) |
| G90475 | LOC104962440 | non-coding | upstream | 256875 | 5088593 ~ 5098887 (+) |
| G90436 | NA | non-coding | upstream | 444970 | 4901022 ~ 4910792 (+) |
| G90413 | NA | non-coding | upstream | 645688 | 4697938 ~ 4710074 (+) |
| G90338 | NA | non-coding | upstream | 965221 | 4385241 ~ 4390541 (+) |
| G90551 | NA | non-coding | downstream | 34800 | 5405442 ~ 5407529 (+) |
| G90552 | NA | non-coding | downstream | 37006 | 5407648 ~ 5412689 (+) |
| G90554 | NA | non-coding | downstream | 41089 | 5411731 ~ 5412261 (+) |
| G90561 | NA | non-coding | downstream | 69570 | 5440212 ~ 5463064 (+) |
| G90647 | NA | non-coding | downstream | 306259 | 5676901 ~ 5677244 (+) |
| AMCG00017446 | NA | other | upstream | 667539 | 4662625 ~ 4688223 (+) |
| AMCG00017445 | NA | other | upstream | 749191 | 4592802 ~ 4606571 (+) |
| AMCG00017422 | leprotl1,LOC103152176 | other | upstream | 2660309 | 2687420 ~ 2695453 (+) |
| AMCG00017388 | LOC108267694,LOC106608525 | other | upstream | 5143826 | 207586 ~ 211936 (+) |
| AMCG00017386 | dctn1,LOC101464740 | other | upstream | 5257365 | 48007 ~ 98397 (+) |
| AMCG00017486 | NA | other | downstream | 1359096 | 6729738 ~ 7188643 (+) |
| G90877 | NA | other | downstream | 2297541 | 7668183 ~ 7671850 (+) |
| G90881 | NA | other | downstream | 2321943 | 7692585 ~ 7693347 (+) |
| AMCG00017508 | NA | other | downstream | 2435736 | 7806378 ~ 7813639 (+) |
| G90955 | NA | other | downstream | 2761726 | 8132368 ~ 8132854 (+) |
