AMCG00017465


Basic Information

Item Value
gene id AMCG00017465
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 5378459 ~ 5379148 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017465
ATGATTGTCCTGCAGAAGCTCACGGTGGCGTTGGTCCTGGTCTGTGTGGCACAGATGGTATTGGTGGCCAACGGGGAGAAGGATAAGGAGggcaagaagaaaaagaaagagggggaCAAAACACTCCCGGACACCAAGCAGCGGCACCACAAGTCCCAGGCAGACAAATCACTGAAGGGCAAGTTTGCCAGCAAAGACAAGAAGACGCAGTGCAGCTGGGCAGCCTCTGCAGGGGACACGACCAGCCTGCGTGTGAGCTGCCAGAAGGAAGAGGCCACCCTGTCCTGCGAGTACACGGCCAAACCCGCCGCCTGTCCGGAGTCTGTGGCAAACCCCAAAGCCTTCTGGAAACAGATCGCCAAAGCCCTGCGGAAAGAGAAGCAGCTGTGCAAAGACGGGACGGGGCTGATCAAAGCTGGGATGTGCAAGAAAGCCCCCAAAGAAGCGCACTTCAGACTGAGCGCCCCCGCAGCCGCAGCCGCAGCCGCAGCCGCAGCCGCACAGCACCCCGCGCAGAAGAGCCCCGGCCCCGGCCGTGCGGACAGCGCCACCCCGCAGCCGGCGATAACCGCCAGAAAGGACTGCCTGGAGAACATCGAGAAGAAGAAAGCGGCCGAAGAATATTGTAGCGGATCCTGGTCCTCTCTGTGCAGTTTCTTCATCTCCATGGTAGACAACGAGGACTGCTGA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017465 True 690 mRNA 0.60 1 5378459 5379148

Neighbor

gene id symbol gene type direction distance location
AMCG00017462 NA coding upstream 3005 5373357 ~ 5375454 (+)
AMCG00017463 NA coding upstream 7817 5355762 ~ 5370642 (+)
AMCG00017464 NA coding upstream 26634 5330756 ~ 5351825 (+)
AMCG00017456 NA coding upstream 105772 5232468 ~ 5272687 (+)
AMCG00017457 NA coding upstream 330217 5009181 ~ 5048242 (+)
AMCG00017461 exosc9,LOC107746036,LOC101063486 coding downstream 46283 5425431 ~ 5459702 (+)
AMCG00017470 kiaa1109 coding downstream 159364 5538512 ~ 5624154 (+)
AMCG00017471 NA coding downstream 245876 5625024 ~ 5640242 (+)
AMCG00017474 fgf2,LOC106604591,LOC102794353 coding downstream 400732 5779880 ~ 5792505 (+)
AMCG00017475 NA coding downstream 429680 5808828 ~ 5816998 (+)
G90477 NA non-coding upstream 155707 5091668 ~ 5222752 (+)
G90475 LOC104962440 non-coding upstream 279572 5088593 ~ 5098887 (+)
G90436 NA non-coding upstream 467667 4901022 ~ 4910792 (+)
G90413 NA non-coding upstream 668385 4697938 ~ 4710074 (+)
G90338 NA non-coding upstream 987918 4385241 ~ 4390541 (+)
G90551 NA non-coding downstream 26294 5405442 ~ 5407529 (+)
G90552 NA non-coding downstream 28500 5407648 ~ 5412689 (+)
G90554 NA non-coding downstream 32583 5411731 ~ 5412261 (+)
G90561 NA non-coding downstream 61064 5440212 ~ 5463064 (+)
G90647 NA non-coding downstream 297753 5676901 ~ 5677244 (+)
AMCG00017446 NA other upstream 690236 4662625 ~ 4688223 (+)
AMCG00017445 NA other upstream 771888 4592802 ~ 4606571 (+)
AMCG00017422 leprotl1,LOC103152176 other upstream 2683006 2687420 ~ 2695453 (+)
AMCG00017388 LOC108267694,LOC106608525 other upstream 5166523 207586 ~ 211936 (+)
AMCG00017386 dctn1,LOC101464740 other upstream 5280062 48007 ~ 98397 (+)
AMCG00017486 NA other downstream 1350590 6729738 ~ 7188643 (+)
G90877 NA other downstream 2289035 7668183 ~ 7671850 (+)
G90881 NA other downstream 2313437 7692585 ~ 7693347 (+)
AMCG00017508 NA other downstream 2427230 7806378 ~ 7813639 (+)
G90955 NA other downstream 2753220 8132368 ~ 8132854 (+)

Expression


Co-expression Network