AMCG00017480


Basic Information

Item Value
gene id AMCG00017480
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 5950836 ~ 5951792 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017480
ATGGAGCTCCAAAGTCAACATGGCAGTGGCGGTTCATTAGTTATGATCCAACAGCCTTCCTTGGACAGCAGGCAAAGGTTTGACTATGAAAGGGAGCTTGCCATTCTCTCGTTAGACCAAATCAAGGCGATCCGGTCCAGCAATGAGTACACCGAGGGCCCTTCGGTGGTGAGAAAACCTGCTCCCAGGACAACCCAGAGGCCAGAGAAGCACGAGAGAACTCATGAGATCATACTTATCAATGTGAATAATAACTACGAGCACCGGTCTCCTACGCAGCCGGGGCAAGGGGGACCACAGTACAACGCTAGGGTGCCTGTGTTGAGCAGATCCACCAGTACAGGGAGTGCTGCGAGTTCTGGAAGCAACAGCAGCGCCTCTTCTGAGCAGGGGCTACTGGGACGCTCCCCCCCAACAAGGCCCAGCTTGGCTCACCGCTCAGACAGGACTGTTCGGACTCAGCCCAAGCCATCAGTTCTGGCAGAGGAGACGCTGAAAATTTCAGGGAAAGAGGATATCACAAAACACCAGTTCATATGCGAACAGTGTGGGAAGTGTAAGTGTGGTGAGTGTACGGCACCTAGGACCCTCCCTTCCTGTCTGGCCTGCAACCGGCAGTGCCTGTGCTCCGCAGAGAGCATGGTCGAGAACGGCACCTGCATGTGCCTGGTGAAAGGGATTTTCTACCACTGTTCAAACGACGACGAGGGAGACTCGTGTGCGGACAATCCCTGCTCCCTCTCCCAGTCGCACTGCTGCTCAAGGTTCCTGTGTATGGGATTAATGTCTCTGCTTTTCCCTTGTTTACTCTGCTACCCTCCCGCCAAGGGCTGCGTGAAGATGTGCCAGGGCTGCTATGACCGGGTGAACAGGCCCGGGTGCCGGTGTAAGAACTCGAACACTGTCTATTGCAAACTGGAGAGCTGGCCCTCACGGAGCCAGGACAAGCCCTCCTGA

Function

GO: NA

KEGG:

id description
K04704 SPRY1; protein sprouty homolog 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017480 True 957 mRNA 0.55 1 5950836 5951792

Neighbor

gene id symbol gene type direction distance location
AMCG00017475 NA coding upstream 133838 5808828 ~ 5816998 (+)
AMCG00017474 fgf2,LOC106604591,LOC102794353 coding upstream 158331 5779880 ~ 5792505 (+)
AMCG00017471 NA coding upstream 310594 5625024 ~ 5640242 (+)
AMCG00017470 kiaa1109 coding upstream 326682 5538512 ~ 5624154 (+)
AMCG00017461 exosc9,LOC107746036,LOC101063486 coding upstream 491134 5425431 ~ 5459702 (+)
AMCG00017477 fat4 coding downstream 360990 6312782 ~ 6317887 (+)
AMCG00017479 fat4,LOC106604622,LOC102795788 coding downstream 409567 6361359 ~ 6370652 (+)
AMCG00017478 LOC106611628 coding downstream 430567 6382359 ~ 6400405 (+)
AMCG00017484 NA coding downstream 892767 6844559 ~ 6844962 (+)
AMCG00017483 NA coding downstream 893183 6844975 ~ 6846106 (+)
G90647 NA non-coding upstream 273592 5676901 ~ 5677244 (+)
G90561 NA non-coding upstream 487772 5440212 ~ 5463064 (+)
G90552 NA non-coding upstream 538147 5407648 ~ 5412689 (+)
G90554 NA non-coding upstream 538575 5411731 ~ 5412261 (+)
G90551 NA non-coding upstream 543307 5405442 ~ 5407529 (+)
G90691 NA non-coding downstream 26372 5978164 ~ 5978368 (+)
G90703 NA non-coding downstream 331365 6283157 ~ 6283441 (+)
G90709 NA non-coding downstream 449942 6401734 ~ 6402188 (+)
G90731 NA non-coding downstream 776240 6728032 ~ 6763072 (+)
G90737 NA non-coding downstream 923175 6874967 ~ 6892610 (+)
AMCG00017446 NA other upstream 1262613 4662625 ~ 4688223 (+)
AMCG00017445 NA other upstream 1344265 4592802 ~ 4606571 (+)
AMCG00017422 leprotl1,LOC103152176 other upstream 3255383 2687420 ~ 2695453 (+)
AMCG00017388 LOC108267694,LOC106608525 other upstream 5738900 207586 ~ 211936 (+)
AMCG00017386 dctn1,LOC101464740 other upstream 5852439 48007 ~ 98397 (+)
AMCG00017486 NA other downstream 777946 6729738 ~ 7188643 (+)
G90877 NA other downstream 1716391 7668183 ~ 7671850 (+)
G90881 NA other downstream 1740793 7692585 ~ 7693347 (+)
AMCG00017508 NA other downstream 1854586 7806378 ~ 7813639 (+)
G90955 NA other downstream 2180576 8132368 ~ 8132854 (+)

Expression


Co-expression Network