AMCG00017482


Basic Information

Item Value
gene id AMCG00017482
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 6718436 ~ 6721393 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017482
AAGCAGCCAATGACAAAAGTACAGGTCGAGCGACACCATCATGGATGATGAAAACATAAACAGCAGATCACTTACAATGATGAAATAACTAGACACTTCTTTCTCAATCGAGAGTTATCCAGTCAGCTCTCTGTAAAGGTTTCCACTGAGAATTTTATAAAactgaagaagaaggaaaaaataactaGACAGGCTTGTTTGAGCGATTCAGGAGTTTGTTTCCGCAATTGAAAGAACCCGGAAATTACTTCAGTTTTGAATATTTGTGGTCGTGCAATCAACAAAATGAAGAGCTGGATTGCGATATTCGTGCCATTTCTTTTCATCTTGCAAGCCGAGAGTTTGAACAATGGAGATAGTGTCTTGCTGCAGCAGATCCAAGTGATCACCCTGTACAAGGGACGCTACACCAGTTCCCGCAGAGCCAGCCCTGTCCTGCAGCTGCAGTGCCTGGGGGGGTCGGCTGGCTGTGGCGCTTTCCTCCCAGACGTGGTCCAGTGCTACAACAAAGGGTGGGATGGTGTTGATGTGCAGTGGGAGTGTAAAACAGACATGGATAACTCGTACAGATTTGGGAAAATCGAAGTGAGTTGCGAGGGTTTCAACTACCCGGAGGACCCCTATGTGCTGAAGGGCTCCTGTGGGCTGGAGTACTCCCTGGAGCTCACGGAGCAGGGCAGGCAGAAGGGCAGAGCGTCCACTGGGGGCTTCGGCTCGGGGTTCTTCCAGGGCTCCTCAAGCAACACAAATTACCAGAGCTCGGGAGGGGAGGCCAGTGGTTTACTTGTCATCGCTTTTCTGCTGCTCCTTGCATACGGAGTGTATAAGATGTTCTTGTGCGGGCCTATGCAAGGACAGCAGCGCTTCCCTGACCACGGCTCTTCAAATGCCCACACCGGTGCCTATGACCAATATGGCGGAGCTCACACAATGGGGCCATCCCCGCCTGGGTTCAAGCCCGACTACACAGGTGCGACTTACACAGATCCTCCACCAAGCTATAGTGATGCTACTGGTGGATATGGCTTCAAAAGCGATTTCACCAGACCTCCACATCAGGCTAATTCAGGACCTGGATTTTGGACTGGGATGGGCACAGGAGGTGTATTAGGATACTTGTTTGGAAGTCAAAGATCTCAGCCCAATGTTTACCCTAGGAATACAGGGCACTCAGACTTCAGACCAACGCCATCACCCGCAAGTACAGGGACACGCTCAGCTTCAGTTTCATCTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017482 True 1236 mRNA 0.50 6 6718436 6721393

Neighbor

gene id symbol gene type direction distance location
AMCG00017476 ankrd50 coding downstream 507434 6181726 ~ 6211002 (-)
AMCG00017472 NA coding downstream 909945 5790848 ~ 5808491 (-)
AMCG00017473 cetn1,LOC106604590 coding downstream 951293 5764570 ~ 5767143 (-)
AMCG00017469 trpc3,trpc7,LOC107678610,LOC107757418,LOC108435597 coding downstream 1198281 5491436 ~ 5520155 (-)
AMCG00017468 bbs7 coding downstream 1233978 5467060 ~ 5484458 (-)
AMCG00017481 NA coding upstream 51429 6772822 ~ 6773798 (-)
AMCG00017485 NA coding upstream 255544 6976937 ~ 6981260 (-)
AMCG00017487 rpia,LOC107568642,LOC107695020,LOC107671341,LOC102776079 coding upstream 488965 7210358 ~ 7221745 (-)
AMCG00017489 NA coding upstream 571463 7292856 ~ 7299945 (-)
AMCG00017490 NA coding upstream 730249 7451642 ~ 7453573 (-)
G90724 LOC103376870 non-coding downstream 24330 6693733 ~ 6694106 (-)
G90718 NA non-coding downstream 321545 6396628 ~ 6396891 (-)
G90717 NA non-coding downstream 322571 6395648 ~ 6395865 (-)
G90716 fat4,LOC104953884 non-coding downstream 327207 6390885 ~ 6391229 (-)
G90670 NA non-coding downstream 937910 5779880 ~ 5780526 (-)
G90751 NA non-coding upstream 39262 6760655 ~ 6876968 (-)
G90759 NA non-coding upstream 162249 6883642 ~ 6883968 (-)
G90762 NA non-coding upstream 344492 7065885 ~ 7124174 (-)
G90783 NA non-coding upstream 484227 7205620 ~ 7205861 (-)
G90796 NA non-coding upstream 500435 7221828 ~ 7226843 (-)
G90715 fat4,LOC106611628,LOC106604622 other downstream 329398 6387252 ~ 6389038 (-)
G90502 NA other downstream 1495389 5222473 ~ 5223047 (-)
G90501 NA other downstream 1497415 5158384 ~ 5221021 (-)
G90400 NA other downstream 2173676 4542775 ~ 4544760 (-)
AMCG00017426 NA other downstream 3876542 2711302 ~ 2841894 (-)
G90746 NA other upstream 11842 6733235 ~ 7188648 (-)
G90749 NA other upstream 391043 7112436 ~ 7113181 (-)
AMCG00017497 NA other upstream 946631 7668024 ~ 7679350 (-)
G90937 NA other upstream 1109492 7830885 ~ 7832592 (-)
G90939 LOC105903575 other upstream 1270744 7992137 ~ 7996595 (-)

Expression


Co-expression Network