AMCG00017489


Basic Information

Item Value
gene id AMCG00017489
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 7292856 ~ 7299945 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017489
ATGCTCCTGGACCGGAACACCTCCTGGCTGGTCAACCTGTCTGTGGCGTCGTCTCTGGTGGGACGAGCGGGCAACGGGAGCCGCACAGAGCTGGAGATCGCGCCCTCGCAGGTGGCCGTGGGTGTGCTGCTGACGCTCATCGACCTGGTCACCTTCCTGGGGAACACTGTGGTATTCATCTGCCCGGTTGTGGAGCGGCGGCTGCGCACTGTCACCTACATGTTCATCATGTCACTGGCCATGGCTGACCTGCTGGTGGCCTGCCTTGTCATGCCCTTCAGTATCATCTACGAGGTGACAGGTGTGTGGCTGTTCGGGGAGCATTTCTGTAAGATGTGGATCTCCTTTGACGTGCTCTTCTGCACCGCCTCCATCGTCACGCTGTGTATCGTGATGACGGTGACAATCTGGGTGTACTCGGCTCTGATCTCCTTCCTACCGGTGATGCAGGGCTGGAACGAGATCCCGGGGCTGGCGTATGACGCAGGCCGCGACTGCGTCTTCGTCACCAACTGGACCTTCGCCATCGTGGCCTCAGCGCTGGCCTTCTACATCCCCTTCCTCATCATGTGCACCATGTACTTCTTCATCTACCGCGCCTCGCGCCTCAAGGCCACCCGCATCGTGTCACAGACCCTGGATCTGCACTACCACCCCGACAGCCGGCGGCCCAACAACCTGCAGCTGGAGCACAAGGCCACGCGCACCATGAGCATCATCATCTCGGTGTTCGTCATGTGCTGGCTGCCCTACTTCGTGCTCAACGTGTGGCTGGCGGCCAAGGGCTGGGGAGGGGAGAGCCTTGCCATCACCTGCCTCTTCAAGGTCATCACCTGGCTGGGCTACTGCAACTCCACCATCAACCCCATGCTCTACGCCTTCCTCAACCGTGACTTCCAACGGGCGCTCAAGAAGCTGCTGGTGTGCCGGCGCTGGCGCTCGCAGGTGGACATCGGTGAGGACATGGTGTCCATCGTCACTTTCTCCCGCACTGCCCAGGACCCCGAGTACAGCAACAAGACCACTGCCCTCCCCAGTGGCCCACACAAGAGCCATGCCAAACAGTGA

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017489 True 1068 mRNA 0.61 3 7292856 7299945

Neighbor

gene id symbol gene type direction distance location
AMCG00017487 rpia,LOC107568642,LOC107695020,LOC107671341,LOC102776079 coding downstream 71111 7210358 ~ 7221745 (-)
AMCG00017485 NA coding downstream 311596 6976937 ~ 6981260 (-)
AMCG00017481 NA coding downstream 519058 6772822 ~ 6773798 (-)
AMCG00017482 NA coding downstream 571463 6718436 ~ 6721393 (-)
AMCG00017476 ankrd50 coding downstream 1081854 6181726 ~ 6211002 (-)
AMCG00017490 NA coding upstream 151697 7451642 ~ 7453573 (-)
AMCG00017492 NA coding upstream 189137 7489082 ~ 7491787 (-)
AMCG00017499 NA coding upstream 288006 7587951 ~ 7594082 (-)
AMCG00017500 gba2,LOC104958191,LOC104958190 coding upstream 325626 7625571 ~ 7639260 (-)
AMCG00017498 NA coding upstream 347701 7647646 ~ 7650108 (-)
G90805 NA non-coding downstream 10379 7266067 ~ 7282477 (-)
G90796 NA non-coding downstream 66013 7221828 ~ 7226843 (-)
G90783 NA non-coding downstream 86995 7205620 ~ 7205861 (-)
G90762 NA non-coding downstream 168682 7065885 ~ 7124174 (-)
G90759 NA non-coding downstream 408888 6883642 ~ 6883968 (-)
G90817 NA non-coding upstream 23785 7323730 ~ 7324107 (-)
G90885 NA non-coding upstream 393638 7693583 ~ 7694005 (-)
G90908 NA non-coding upstream 473273 7773218 ~ 7784195 (-)
G90938 NA non-coding upstream 528553 7828498 ~ 7830609 (-)
G90948 NA non-coding upstream 714450 8014395 ~ 8023105 (-)
G90746 NA other downstream 104208 6733235 ~ 7188648 (-)
G90749 NA other downstream 179675 7112436 ~ 7113181 (-)
G90715 fat4,LOC106611628,LOC106604622 other downstream 903818 6387252 ~ 6389038 (-)
G90502 NA other downstream 2069809 5222473 ~ 5223047 (-)
G90501 NA other downstream 2071835 5158384 ~ 5221021 (-)
AMCG00017497 NA other upstream 368079 7668024 ~ 7679350 (-)
G90937 NA other upstream 530940 7830885 ~ 7832592 (-)
G90939 LOC105903575 other upstream 692192 7992137 ~ 7996595 (-)
AMCG00017520 NA other upstream 1173545 8473490 ~ 8514955 (-)
AMCG00017531 NA other upstream 1432815 8732760 ~ 8748743 (-)

Expression


Co-expression Network