AMCG00017493


Basic Information

Item Value
gene id AMCG00017493
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 7655383 ~ 7658125 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017493
GTTGGTGTGTGGGATTTAATGATGCCCTTCGGTAAAAACTAAGGAAAGTGTTCCAGTAATGGAAGGAGGAGAGTGATCACAATCTGGTGTGAACAGTGTGTGCTGAGGAGGGGTTTGTCAGTAAATGGATGTAAGGAGATATCCAGGGCATCTCTTTACTCAAAGGGAAACTCCCGACACAGTATATAAATGCAACAGCATGCTTCTGCTGTCACattagcagagagagacagacagacagactgacagatcCCGGCGAAACACTGCATCCCTGCAGCACTCTGGACAGCGACTCCCCCTCGGCCCCATGGCAGTGCTCCCGATCGCGCTCCTCGCAGGACTGCTACTCAGCCTTGCACGAGgcatGGACGAAGGCTCAGTGGACTGCTGTCTGACAACCAGCCCTACTCCCATCCCCTTTCAGATCGTGAGGGAATACTTCGCTCAGAGCAATTCGGAGGGCTGCATCATCCCGGCTATAGTATTCATCACCAAACGTAACAGGCGGCTGTGTGCTCCCCCTGATGCCCCCTGGGTCCAGGAGCTGATTGTGAGACTGAAAAAACCACAACACCCACACAGCAGAAAGAAAGGACCTCCCAGGGGGAAGATGTGGTAAAAACAGCCAAGGATGGAGCTGGGAGACTGCAACCTGCCACACAGCGGTGCCCAGCATGGTGGGGGCAGTGCCCTTATAGAGTTTGGCAGAGCTCCATCAACATGGCAGTGTGGATGTCTGGCATACTGTACTTAAATAAGACACCCCTACATATGTGATAGTTTTCTGCTGCAACTAACTACTGtggttcttctttttttatggtGAAGTGCACTGCTGAGTTGATCTCagtgtgtttcttttgtgtCCTTTCCTTCCTGTGATGTAGCCAGTGTATCCACATGAGCAATGTGTTCTTAGTGAAGGCTGGCTTACCTGTACTTcctagaaaatacaaattaaatatatttgacaacaaaaaaaagttttgaagtGTTTCACTTCTATTTCTCCACATACTATTATATCTCCGAGGCAGAGTCTGGCTTGTTGCCACAGGTCAGTCTCAAAGTCTGTGAGGCAGTGGTTAGGGGTATTTTCACAGTCCTTCTCTCAGGGTGTGCTGTCATAGCCTCCAGGGCCACATTGTGTAGAGCAAAGCGCCCCCCAGCAGCAAGGTGAAGC

Function

GO: NA

KEGG:

id description
K05512 CCL19, ELC; C-C motif chemokine 19

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017493 True 1183 mRNA 0.49 4 7655383 7658125

Neighbor

gene id symbol gene type direction distance location
AMCG00017496 NA coding upstream 8123 7642275 ~ 7647260 (+)
AMCG00017494 NA coding upstream 49184 7605288 ~ 7606199 (+)
AMCG00017491 pik3c3 coding upstream 180361 7459064 ~ 7475022 (+)
AMCG00017488 eif2ak3,LOC107683275,LOC106611393 coding upstream 375891 7240443 ~ 7279492 (+)
AMCG00017483 NA coding upstream 809277 6844975 ~ 6846106 (+)
AMCG00017495 NA coding downstream 5583 7663708 ~ 7667075 (+)
AMCG00017503 NA coding downstream 43989 7702114 ~ 7712194 (+)
AMCG00017510 NA coding downstream 172873 7830998 ~ 7835213 (+)
AMCG00017509 NA coding downstream 333990 7992115 ~ 8023128 (+)
AMCG00017511 NA coding downstream 517605 8175730 ~ 8177002 (+)
G90857 NA non-coding upstream 28931 7624692 ~ 7626452 (+)
G90743 NA non-coding upstream 502639 7112416 ~ 7152744 (+)
G90733 NA non-coding upstream 644322 6974661 ~ 7011061 (+)
G90737 NA non-coding upstream 762773 6874967 ~ 6892610 (+)
G90878 NA non-coding downstream 14018 7672143 ~ 7672373 (+)
G90879 NA non-coding downstream 19774 7677899 ~ 7678465 (+)
G90905 NA non-coding downstream 132334 7790459 ~ 7790658 (+)
G90915 NA non-coding downstream 193043 7851168 ~ 7851374 (+)
G90917 NA non-coding downstream 264067 7922192 ~ 7922640 (+)
AMCG00017486 NA other upstream 466740 6729738 ~ 7188643 (+)
AMCG00017446 NA other upstream 2967160 4662625 ~ 4688223 (+)
AMCG00017445 NA other upstream 3048812 4592802 ~ 4606571 (+)
AMCG00017422 leprotl1,LOC103152176 other upstream 4959930 2687420 ~ 2695453 (+)
AMCG00017388 LOC108267694,LOC106608525 other upstream 7443447 207586 ~ 211936 (+)
G90877 NA other downstream 10058 7668183 ~ 7671850 (+)
G90881 NA other downstream 34460 7692585 ~ 7693347 (+)
AMCG00017508 NA other downstream 148253 7806378 ~ 7813639 (+)
G90955 NA other downstream 474243 8132368 ~ 8132854 (+)
AMCG00017526 paics,LOC107555752 other downstream 1029572 8687697 ~ 8700754 (+)

Expression


Co-expression Network