AMCG00017532


Basic Information

Item Value
gene id AMCG00017532
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 8772209 ~ 8780221 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017532
ATGGCCCGGCTGTCCTGCTCCCTGGCTTTGCTGTGTCTCTATGGAGTGCTGCTCACAATGGGTGTCTGGGCCCAACCCTGCAACCTGACCCTGTCCTCTCTGGACCTGCACAGTGTCCTGCAGTGGGACTGTCCTGGCTTGCCCCCTAACACACGCTATACTGTGCAGACTATGAAAGTAAGTCAGGGGATGTGGCAAGACGTTGAGGGCTGTTCGAATGTCTCCACCTCTTTCTGTGACCTCTCTCCTGCCTTCTCCAAAACTGACCAGCTCTACTTCACACGGATCAGAGGAGTCTGGGCTGGAGGAGACACCGACTGGACTCAGAGTCCCTTGCAATTCCACCCTGAAAGAGAcaCGGCCCTCAGTCCGCCcatcctctctgtgtctgtgcagggaGAGGcggtgagtgtgagtgtgaccCTGCGCTGCTCACCGTACCAGAGAAAGCGACGCtcaaagtgtctcagtgtcccATCCGTCCTCTCCACAACGACCATCTCCATCAGTTTGTACAGAGATGAGCCATCACCTGTTGTACTAAAGCACCACACTGCGTCTCCATCGCTGGTACAGGTGAGCGACACAGTGCGGCTCACAGGGCAGCACAACCCAGAGCTGCCCCAGACAGCAACACTGCCAGCATGGTTGAAGCTGACAGCTGTGTTGTCTGCACTACTCCTGGCCGTATTCGTGGCAGCCGTCTTCCTCAAGATGAGATTACCAAAGGCACCCCTCCCCCGGCCACTGGAGATGTTGCATGAGGGGTTTCCTGGGGGGCTGTGTCCAGGGGTGGAAGGAGGGGAGGAGCAGTGGGACCGGCTGTCCATCCTCTCACTATCTATGTCCCACTGCAGCCCCACGCAGTGCCAGCTGGCCCCCGCCACCTTGACACACGAGAACCCCACTTACCACAGCAACGGCATCCCCCAGGACTCCAGGGACAGCGAGGGATACTGGGTAGGGGGGGGATCCCTGGGGGCTCCAGAGGAATCGTCTTGTGGGCCTGACTATTCCCCAACTCTGCCCCAATGCATGCTGGCCTTTTCCTCTGGCTTGTACAGCACAGCCGTGGCCTTTGAGACACCGTGCCCCTCCCAGACTGACGGCACAGTGGAGGCAGAGATGCCACAAGCAGCCTCACGTCCTCTCCTGTGTGGGGGAGGGGACCAGGACATACCACTACACACGGTGAGGCTGAGGGCTGGTGCAGAGGCAGATTGGCAGAGTAATGACTGGAGCCCTTTGGTCCAGCTCCCTCTGGGGCTGGGCAGTGGGGTTTGGCCAATGGTGAGGGACACTGAAGTTCAGGGGGCAGATGATAGGTCTCCCCTGTCCAAGATTGAGGACAGTGACCTGGGTGACCAAAAGGCATTTCCAACATCCCTGTTCTGTCACCAGATACTCTCTTCAGAGAAGGCGCTCTGCCACCCTGGACATACCCCAGATTCTCCTCCTATTTCCAGGAACTTGTATCATGCCTGTCCCCCCGAGGTCCCTCCACTGACATTCACCTGGACTGTACAAAACCGTGAGATTGAAGACAGTTCTGGATCCTTACCTGGGAATGCTGCTTGTGAGACGTGGCCCCCTCAAGGCACTCTCAGTCTGAACAGCCTGCTGCACTGGAGCCCAAACACAGGGGCCTCTGAGTCAATAGACTCGCCAGAGCACTGGAGCACAACGGACATGTACAGGGTAGACTcgggaggccaagtcaacacagATGAAGAGAAGCTTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017532 True 1743 mRNA 0.58 7 8772209 8780221

Neighbor

gene id symbol gene type direction distance location
AMCG00017528 NA coding downstream 41496 8701878 ~ 8730713 (-)
AMCG00017530 ppat,LOC106560282 coding downstream 77850 8679813 ~ 8694359 (-)
AMCG00017529 NA coding downstream 94396 8663650 ~ 8677813 (-)
AMCG00017524 NA coding downstream 145023 8607059 ~ 8627186 (-)
AMCG00017519 clocka,clock,LOC107701480 coding downstream 355730 8387062 ~ 8416479 (-)
AMCG00017536 LOC107683324 coding upstream 9961 8790182 ~ 8798194 (-)
AMCG00017537 NA coding upstream 34829 8815050 ~ 8834367 (-)
AMCG00017535 NA coding upstream 56632 8836853 ~ 8843458 (-)
AMCG00017539 NA coding upstream 189970 8970191 ~ 8972241 (-)
AMCG00017540 slc10a4,LOC102785779 coding upstream 193394 8973615 ~ 8976665 (-)
G91064 NA non-coding downstream 166583 8603621 ~ 8605626 (-)
G91016 NA non-coding downstream 390539 8289765 ~ 8381670 (-)
G91005 NA non-coding downstream 485092 8286889 ~ 8287117 (-)
G90992 NA non-coding downstream 542648 8229315 ~ 8229561 (-)
G90965 NA non-coding downstream 607304 8164654 ~ 8164905 (-)
G91294 NA non-coding upstream 814709 9594930 ~ 9595162 (-)
G91297 NA non-coding upstream 852424 9632645 ~ 9632859 (-)
G91298 NA non-coding upstream 882343 9662564 ~ 9662788 (-)
G91300 NA non-coding upstream 895325 9675546 ~ 9675779 (-)
G91301 NA non-coding upstream 897250 9677471 ~ 9680221 (-)
G91119 NA other downstream 16302 8755288 ~ 8755907 (-)
AMCG00017531 NA other downstream 23466 8732760 ~ 8748743 (-)
AMCG00017520 NA other downstream 257254 8473490 ~ 8514955 (-)
G90939 LOC105903575 other downstream 775614 7992137 ~ 7996595 (-)
G90937 NA other downstream 939617 7830885 ~ 7832592 (-)
AMCG00017556 NA other upstream 1581079 10361300 ~ 10497104 (-)
AMCG00017563 NA other upstream 2723803 11504024 ~ 11506820 (-)
AMCG00017569 NA other upstream 3097139 11877360 ~ 11900600 (-)
AMCG00017582 NA other upstream 3527560 12307781 ~ 12322370 (-)
AMCG00017631 NA other upstream 5652937 14433158 ~ 14484818 (-)

Expression


Co-expression Network