Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017534 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 8807015 ~ 8808994 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017534 | True | 695 | mRNA | 0.56 | 3 | 8807015 | 8808994 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017533 | sgcb,LOC107597442,LOC106584109 | coding | upstream | 547 | 8799335 ~ 8806468 (+) |
| AMCG00017523 | NA | coding | upstream | 152673 | 8647446 ~ 8654342 (+) |
| AMCG00017521 | NA | coding | upstream | 205360 | 8591169 ~ 8601655 (+) |
| AMCG00017522 | exoc1,LOC106560275 | coding | upstream | 220344 | 8567667 ~ 8586671 (+) |
| AMCG00017525 | NA | coding | upstream | 241204 | 8560132 ~ 8565811 (+) |
| AMCG00017538 | fryl | coding | downstream | 60120 | 8869114 ~ 8969478 (+) |
| AMCG00017543 | NA | coding | downstream | 208885 | 9017879 ~ 9021042 (+) |
| AMCG00017544 | NA | coding | downstream | 277583 | 9086577 ~ 9103203 (+) |
| AMCG00017545 | NA | coding | downstream | 318769 | 9127763 ~ 9147339 (+) |
| AMCG00017551 | NA | coding | downstream | 448212 | 9257206 ~ 9372195 (+) |
| G91128 | NA | non-coding | upstream | 22926 | 8783867 ~ 8784089 (+) |
| G91104 | NA | non-coding | upstream | 74383 | 8732368 ~ 8732632 (+) |
| G91004 | NA | non-coding | upstream | 520287 | 8286292 ~ 8286728 (+) |
| G90991 | NA | non-coding | upstream | 577439 | 8229315 ~ 8229576 (+) |
| G90924 | NA | non-coding | upstream | 817055 | 7989696 ~ 7989960 (+) |
| G91135 | NA | non-coding | downstream | 10719 | 8819713 ~ 8824837 (+) |
| G91151 | NA | non-coding | downstream | 29653 | 8838647 ~ 8841038 (+) |
| G91307 | NA | non-coding | downstream | 1357536 | 10166530 ~ 10166747 (+) |
| G91310 | NA | non-coding | downstream | 1488408 | 10297402 ~ 10297808 (+) |
| G91329 | NA | non-coding | downstream | 1759184 | 10568178 ~ 10568428 (+) |
| AMCG00017527 | tkfc,LOC107731922,LOC107095500 | other | upstream | 42112 | 8751713 ~ 8764903 (+) |
| AMCG00017526 | paics,LOC107555752 | other | upstream | 106261 | 8687697 ~ 8700754 (+) |
| G90955 | NA | other | upstream | 674161 | 8132368 ~ 8132854 (+) |
| AMCG00017508 | NA | other | upstream | 993376 | 7806378 ~ 7813639 (+) |
| G90881 | NA | other | upstream | 1113668 | 7692585 ~ 7693347 (+) |
| G91281 | LOC103376870 | other | downstream | 710779 | 9519773 ~ 9583280 (+) |
| G91452 | cc2d2a | other | downstream | 3070620 | 11879614 ~ 11880499 (+) |
| AMCG00017600 | NA | other | downstream | 4387901 | 13196895 ~ 13259760 (+) |
| AMCG00017615 | sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 | other | downstream | 4972272 | 13781266 ~ 13830819 (+) |
| AMCG00017620 | htra3,LOC106577909 | other | downstream | 5216642 | 14025636 ~ 14039063 (+) |
