XLOC_006170 (fam135a)


Basic Information

Item Value
gene id XLOC_006170
gene name fam135a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 39182099 ~ 39228382 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012148
GCGCCTCCCTTAAACTCAGTCTTACAACACAGAGAAGACAAGTTTGGACAATATTTACGATCTACGACTCTCACCGCTCACATTATGGagatgtgatttattttttcatcaaGTCCGACCGACCTGGAGTTTTACCTCTGCTTGAAAGACAGGGCTTGGGCGGATTTTCAACGGCATGCGGAGGAATTAGGCAGCCGGGTGATCAGAGCGTCGTGGCGGCATTGCTCTGAAATCCAGCCCGTGGTTTGAGGCCTATATTCCCGAAGCGGATACATGATTGTGTTGATCAGTTGACATGAGGAGAGAAGATACTGGACCGAGTCAGGACGGTTTTGCTGCAGATCGTTTGAGTCCGGCCCTCCTCCAGCCCTGAATCCAGCATGACGGAGGTCCAGGCCACAGTGGAGTTCTCTGTGGAGCTCCACAAATTCTACAATGTGGATCTCTTCCAAAGAGGATTCTATCAGGTCCGAGCCAGTATGAAAGTGCCGCCACGGATCCCGCAGAGGGTGGAAGCCAGTCTGCTGCATCCCATAGGTTCGGATCTGGCTTTTCCAGCATCAGTTCAAGATGATGTGGTCTGCAGCAAAACCTTTCAGATCCTTTACAAAAACGAGGAGATTGTGGTCAACGACGTCTTTGTATTCAAAGTCATGATGCTGCTCGATGCAAAGAAGGTAGAAGAGTCTTTAAATGAAGTTGACTTTCAGCTGTGTTTGGACCTGTTCTTCACTGATGGAGACTACTCGCCTGAGGAGCCCAGTTCTCTGCAGAGCATCAGCAGCCGTACGCTGCGTTTGCACTTTAGCCTCCACAGAGGCATCCACCACCACGTCAACGTCATGTTTGACTACTTCCACCTGTCTGTCATCTCTGCCACAATCCATGCTTCACTGGTGGCTCTGCATCAGCCTCTAATAAGTTTCCCCCGGCCAGTAAAAAGCACCTGGTTGAATCGTAATGCTCCGGCACAGAGCAAAGACTCCCTCATCCCACCGCTGGAGACTGTGGTGTTCGGCAGCACCTACGTCAAGCAGCTGTCCCCTGATGGCAAAAGCTTCCTGGTATCGGATCAGTGCCTCCAGCATGCCTTCAGCCTGCACCAGAACATGTGTGCCAACCTGCTGCGGGCATATCAGAGCCTGTTCTGTTACTTAACCTCCCTGACCAAGAATCTGCCCGCATCCCAGCGCATGGAGCTTGCCAAGCCCAGCATGCAGGTCCTTTATGAACGAGTTCTCAGAAGACCTTACCCTCCAGGCCAAAGGCACGTCTACATAGAGGAACTTGATGTGGAGGTCCGACTTCATGAGCTTTGTGAACAAGTCAAGCAGAAAGCAGAGAGCCCAGATGAGTTGGCTGAATTGGTGAACATGAATTTGGCGCAACTATGTTCCCTACTCATGGCTTTGTGGGGGAATTTCCTGGAAGTTGTGTCACTAAATGAGCGTGTTTTTGTGCTTTTGGCCCAGGAGCACCACACACTACGGgtGCAAAGATTTGCTGAAGCTTTCTTTTGTCTTGAACACCCACGACAGAGTGCACTGGCCTACCAGGAACTGCATGCTCACAGTCACCAACAAATGACCACAGCTATCAAAAGCTCTTCCTACTTCTTGTCCTTACCACCTCTTCCTGTTGAATGTGCTGATCTTGACGGGGATGTGAACTCCCTACCAATCATCTTTGAGGACAGATATTTGGAGTCTGTTACTGAAGATCGTGATGGTCCATGGCTTGGACTCCAAAACAACAGGAGTGGCTCTGTGTCCGCCAAAGCAGATAGATCCAACTCAAAGGACTGCATTGCCAGTGGAGCCCTCGGTCCGTATCCAGATAAGCAGCAAGCTTCCTTTGCCACTGCTTGGCCTGAACAAAACGAGCCTTCCCTTAAATCCAAAGCCAAGTCCATCAAGCTCAAGAAGAACACCAAGACCGAAAACTCAAAGAAGCTGATCAGACAGAGCTCGAAAGATTCTGTGGTGCTCACAGGCTACAAGAACTTGAAGGTTCCTCACAGTGAAAAGACCATTAAGTCCAAAGACATCGACCATCAATGCAATCAGAGAGATGAGCTAGAGGATGGAGGTAAATTCCTTCTTCAGAATGAAACCACGACCACGCATTGTGCTCAGAATGCTAAAGACTGCACATCTGGCAACCTTCAAGGTAACGCCACAATCCTAAGTGACGGCTTTCCCAATCTTATGAGTTTGCAAATGCAGGCCAGGCCCCAGGCAGGTACTGGAGCAGAGGCCGCCGCTGCCAGAGTAGATCCCACACATCCACCTGCTGGCCTCAGACATATTGATGTCAAACCCAGTGACAAGGACCCCTACCAGGGCGATAAGGTCACCGTTCTCTTACCGCACCACCCAGAGCGCACCACCAAGAGGGATGTTCCAGAAATCACACAGACTGATTTCTCTGAGTTCAAGAGTCGAGTTGGAGATGGTGCTACTTTCGTCGGACCTTGTGGAGCGGCTTTGAGGAACGATAATATTCCTCAAGCCTCCTCCAGACTCTCGGATTCCGGAATTGAAAGCGAACCCAGCTCTGCGACACAGCTAGCCCCGGTTTCTCCATCTCCTTTTGCTCCTATTGGGATCGAAGCACCTACAGAGCTGATTCCTCACAGACCACCTCCGCTCAGTCCTGCTTCCAGAGGAGCCACCGCATTGGAAGGCCTCAATCCTGAAAGCACCAGCGGCGTAAGCGGCGTCCAATCTTCCCTCACCTCCATCAACTCACTCCCTTCGGATGATGAGGTGGAGACAGAGGCCACCAGCAGGAAGTCCAGCATCCTGGTCCAGGAACAGAGTCTCATCTTCTCCGGAGAATCTCAAAGCCTCTTGCTGACAAACTCTAGAGTCTTGGCTCAACAAAAAGCCAGTCATGGAGATGGGATGGACTCTGCTTTGCAGTCCCGCTGTGAAACTTCTGCTTCTGACAGACTTGTCGGATCTAACGAGACAGATCTTCCAGGTGGTCCGGAAGCTTGTAGTGAACCACAGACAGCAGCCCAGTCCAGTACATCAGTCACCAGCAGCACAGACATGGTGAAGAAAGGCTTTGTAGAAAACTACTTTGGCTCTCGGTCCAGTACTGATATATCTGAAATCAGCCCTTTAGAGACGGCAGCCATAACATTGGGTATTCAGACATGCCCCAATGCTAATGATGAAGAGGATGAGGAGGAAGAGCAGGAGCATGAGATGATTGAGAATGGTTATTATGAGGAGACCGATGGTGTGGTTTATGTTAATGGGCTCCCGGAGGATGAAGGGAGGTGTGAAGATGGAGGAGCGGAGGGAAGAACACTGTTTTATGATCATCTTGGTTTAGAGCAGCTCCAGGAAACTTACATTCCCTCTGCCGGCATTCGGACACGGCCTACTGGACCAGCACCAACCAGCAGCGACTTATGCTGGTACAAGAGCGCCCCCACTGCTCAGATGACGGCttttgtcCAAGCGAAAGAGGAGTTGAAACAACTAAAGCTGCCAGGCTTCCTGTACAGTGAGGTGGCAGATCTGGCATCCACTGTGCCATATTTCAGCATGGATGAGGATGAAAACTGTGATGATGGCATACACCTTATAGTGTGTGTACACGGCTTGGATGGTAACAGTGCAGATTTGCGCCTGGTGAAGACTTATCTGGAGCTTGGGTTGCCTGGAGCTAGGATAGATTTTCTGATGTCTGAGCGAAATCAGAATGACACATTTGCTGATTTTGAGTCCATGACCGACAGACTTTTGGATGAAATTGTGCAGTACATACAAATCTACAACCTCACAGTTTCCAAGATCAGTTTTGTTGGTCATTCTCTGGGAAATCTGATCGTGCGCTCTGTGCTGACGAGGCCCAGGTTTAAGTGTTATCTCAGCCGACTGCACACCTTTCTGTCTCTGTCTGGACCTCACCTCGGCACACTGTACAACAGCTCAGCACTCGTCAATACTGgactGTGGTTCATGCAGAAGTGGAAGAAGTCTGGCTCTCTGCTGCAGCTGACCTGTCGAGACCATTCAGACCCGCGTCAGACCTTTCTCTATAAGCTGAGCAAGAAAGCAGGCCTTCAGTTCTTCAAGAATGTGGTGTTGGTGGGCTCTCTTCAGGACCGATACGTTCCTTATCACTCCGCTCGAATCGAGATGTGCAAAACAGCCTTAAAGGACAAACAGACTGGTCCGGTGTATGCTGAGATGATCGAGAACCTTCTCCTTCCTGTGCTTCAGAACAAAGACTGTAACCTGGTGCGTTACGACGTCATCCACGCGCTGCCCAACACCGCCAACTCTCTGATCGGCCGCGCAGCTCACATCGCCGTCCTGGACTCTGAGATTTTCCTGGAAAAGTTCTTCCTGGTGGCAGGGCTCAAGTTTTTTCAGTAGCCGTGCTGGACGGGAAGTGAATACCTCACTGCAAACGGACATTTCTTTCCCGGTTATTTTCCCCCCCTCACGGTTTTAAGTATGCTCCTGGAGGTAAAGCAAAATATATcagtgttatttttgttattgattcTGTTTCTATTTAGTCTGTTGTGAACGTGGAATtgatcgtttttatttttttactgccatgtctttttatttttaagaaattttaATGTTCTGTTCATTATTAAGAAAATCAAACCTCCTCgtggtatttttttttcagtgttatttaTGTACAACGTTAATTTCTACGGTTTTCGTTTTAACCATTCTATTAAACTATCTTATGCTGAACTGGAAATGTAGctgctaaaaaaaaactaaagttaaaAGAATGAACTATTTATTCGGGGTGAAGATCCAGGCCGTCTTCATGGTGAAAGCACGTTCACTTGAACATTCTCGAGCATCTAGGGTTGACTTGCATCTgaactgcataaaacattttttctatTAAGAAATTGCCATTTGActacacatttttttacaaaccttgttttTATTACAAAGCTTCCTGAACATGGACGAACGTGATTGTAGCTGATACGAAGCAGCCTTGGACCGCGCGTTGGTTTTATACGATGTCTCTGGTGCCCATTTTGCATTCTCATGCACAATCTACACCCAGCCTGGTGTTGGGTGGGGGGGGAACGCACGCTCAgcatgttaacattttattttattacaggtGATACAGGTAGCTAATTAACAGTGGGCCTGGTGTGTTGGGTTGATGGTTCTTCAGTTTCAAACAGCACAATATTACTAATCGGATCACAGTTTTGGGGAAGTATTTATGTTTGGTTTCCTAAGGACGAGTTCATTGATGCTTGTGTGCGAAGAgactttaaataaaacatgaatttatcctgtttttgttaaaatggttttgTAACATGGACTCCACATTTCATTAAATGTATttgcaataaatgtttttttttt
>TCONS_00012149
ATGACGGAGGTCCAGGCCACAGTGGAGTTCTCTGTGGAGCTCCACAAATTCTACAATGTGGATCTCTTCCAAAGAGGATTCTATCAGGTCCGAGCCAGTATGAAAGTGCCGCCACGGATCCCGCAGAGGGTGGAAGCCAGTCTGCTGCATCCCATAGGTTCGGATCTGGCTTTTCCAGCATCAGTTCAAGATGATGTGGTCTGCAGCAAAACCTTTCAGATCCTTTACAAAAACGAGGAGATTGTGGTCAACGACGTCTTTGTATTCAAAGTCATGATGCTGCTCGATGCAAAGAAGGTAGAAGAGTCTTTAAATGAAGTTGACTTTCAGCTGTGTTTGGACCTGTTCTTCACTGATGGAGACTACTCGCCTGAGGAGCCCAGTTCTCTGCAGAGCATCAGCAGCCGTACGCTGCGTTTGCACTTTAGCCTCCACAGAGGCATCCACCACCACGTCAACGTCATGTTTGACTACTTCCACCTGTCTGTCATCTCTGCCACAATCCATGCTTCACTGGTGGCTCTGCATCAGCCTCTAATAAGTTTCCCCCGGCCAGTAAAAAGCACCTGGTTGAATCGTAATGCTCCGGCACAGAGCAAAGACTCCCTCATCCCACCGCTGGAGACTGTGGTGTTCGGCAGCACCTACGTCAAGCAGCTGTCCCCTGATGGCAAAAGCTTCCTGGTATCGGATCAGTGCCTCCAGCATGCCTTCAGCCTGCACCAGAACATGTGTGCCAACCTGCTGCGGGCATATCAGAGCCTGTTCTGTTACTTAACCTCCCTGACCAAGAATCTGCCCGCATCCCAGCGCATGGAGCTTGCCAAGCCCAGCATGCAGGTCCTTTATGAACGAGTTCTCAGAAGACCTTACCCTCCAGGCCAAAGGCACGTCTACATAGAGGAACTTGATGTGGAGGTCCGACTTCATGAGCTTTGTGAACAAGTCAAGCAGAAAGCAGAGAGCCCAGATGAGTTGGCTGAATTGGTGAACATGAATTTGGCGCAACTATGTTCCCTACTCATGGCTTTGTGGGGGAATTTCCTGGAAGTTGTGTCACTAAATGAGCGTGTTTTTGTGCTTTTGGCCCAGGAGCACCACACACTACGGgtGCAAAGATTTGCTGAAGCTTTCTTTTGTCTTGAACACCCACGACAGAGTGCACTGGCCTACCAGGAACTGCATGCTCACAGTCACCAACAAATGACCACAGCTATCAAAAGCTCTTCCTACTTCTTGTCCTTACCACCTCTTCCTGTTGAATGTGCTGATCTTGACGGGGATGTGAACTCCCTACCAATCATCTTTGAGGACAGATATTTGGAGTCTGTTACTGAAGATCGTGATGGTCCATGGCTTGGACTCCAAAACAACAGGAGTGGCTCTGTGTCCGCCAAAGCAGATAGATCCAACTCAAAGGACTGCATTGCCAGTGGAGCCCTCGGTCCGTATCCAGATAAGCAGCAAGCTTCCTTTGCCACTGCTTGGCCTGAACAAAACGAGCCTTCCCTTAAATCCAAAGCCAAGTCCATCAAGCTCAAGAAGAACACCAAGACCGAAAACTCAAAGAAGCTGATCAGACAGAGCTCGAAAGATTCTGTGGTGCTCACAGGCTACAAGAACTTGAAGGTTCCTCACAGTGAAAAGACCATTAAGTCCAAAGACATCGACCATCAATGCAATCAGAGAGATGAGCTAGAGGATGGAGGTAAATTCCTTCTTCAGAATGAAACCACGACCACGCATTGTGCTCAGAATGCTAAAGACTGCACATCTGGCAACCTTCAAGGTAACGCCACAATCCTAAGTGACGGCTTTCCCAATCTTATGAGTTTGCAAATGCAGGCCAGGCCCCAGGCAGGTACTGGAGCAGAGGCCGCCGCTGCCAGAGTAGATCCCACACATCCACCTGCTGGCCTCAGACATATTGATGTCAAACCCAGTGACAAGGACCCCTACCAGGGCGATAAGGTCACCGTTCTCTTACCGCACCACCCAGAGCGCACCACCAAGAGGGATGTTCCAGAAATCACACAGACTGATTTCTCTGAGTTCAAGAGTCGAGTTGGAGATGGTGCTACTTTCGTCGGACCTTGTGGAGCGGCTTTGAGGAACGATAATATTCCTCAAGCCTCCTCCAGACTCTCGGATTCCGGAATTGAAAGCGAACCCAGCTCTGCGACACAGCTAGCCCCGGTTTCTCCATCTCCTTTTGCTCCTATTGGGATCGAAGCACCTACAGAGCTGATTCCTCACAGACCACCTCCGCTCAGTCCTGCTTCCAGAGGAGCCACCGCATTGGAAGGCCTCAATCCTGAAAGCACCAGCGGCGTAAGCGGCGTCCAATCTTCCCTCACCTCCATCAACTCACTCCCTTCGGATGATGAGGTGGAGACAGAGGCCACCAGCAGGAAGTCCAGCATCCTGGTCCAGGAACAGAGTCTCATCTTCTCCGGAGAATCTCAAAGCCTCTTGCTGACAAACTCTAGAGTCTTGGCTCAACAAAAAGCCAGTCATGGAGATGGGATGGACTCTGCTTTGCAGTCCCGCTGTGAAACTTCTGCTTCTGACAGACTTGTCGGATCTAACGAGACAGATCTTCCAGGTGGTCCGGAAGCTTGTAGTGAACCACAGACAGCAGCCCAGTCCAGTACATCAGTCACCAGCAGCACAGACATGGTGAAGAAAGGCTTTGTAGAAAACTACTTTGGCTCTCGGTCCAGTACTGATATATCTGAAATCAGCCCTTTAGAGACGGCAGCCATAACATTGGGTATTCAGACATGCCCCAATGCTAATGATGAAGAGGATGAGGAGGAAGAGCAGGAGCATGAGATGATTGAGAATGGTTATTATGAGGAGACCGATGGTGTGGTTTATGTTAATGGGCTCCCGGAGGATGAAGGGAGGTGTGAAGATGGAGGAGCGGAGGGAAGAACACTGTTTTATGATCATCTTGGTTTAGAGCAGCTCCAGGAAACTTACATTCCCTCTGCCGGCATTCGGACACGGCCTACTGGACCAGCACCAACCAGCAGCGACTTATGCTGGTACAAGAGCGCCCCCACTGCTCAGATGACGGCttttgtcCAAGCGAAAGAGGAGTTGAAACAACTAAAGCTGCCAGGCTTCCTGTACAGTGAGGTGGCAGATCTGGCATCCACTGTGCCATATTTCAGCATGGATGAGGATGAAAACTGTGATGATGGCATACACCTTATAGTGTGTGTACACGGCTTGGATGGTAACAGTGCAGATTTGCGCCTGGTGAAGACTTATCTGGAGCTTGGGTTGCCTGGAGCTAGGATAGATTTTCTGATGTCTGAGCGAAATCAGAATGACACATTTGCTGATTTTGAGTCCATGACCGACAGACTTTTGGATGAAATTGTGCAGTACATACAAATCTACAACCTCACAGTTTCCAAGATCAGTTTTGTTGGTCATTCTCTGGGAAATCTGATCGTGCGCTCTGTGCTGACGAGGCCCAGGTTTAAGTGTTATCTCAGCCGACTGCACACCTTTCTGTCTCTGTCTGGACCTCACCTCGGCACACTGTACAACAGCTCAGCACTCGTCAATACTGgactGTGGTTCATGCAGAAGTGGAAGAAGTCTGGCTCTCTGCTGCAGCTGACCTGTCGAGACCATTCAGACCCGCGTCAGACCTTTCTCTATAAGCTGAGCAAGAAAGCAGGCCTTCAGTTCTTCAAGAATGTGGTGTTGGTGGGCTCTCTTCAGGACCGATACGTTCCTTATCACTCCGCTCGAATCGAGATGTGCAAAACAGCCTTAAAGGACAAACAGACTGGTCCGGTGTATGCTGAGATGATCGAGAACCTTCTCCTTCCTGTGCTTCAGAACAAAGACTGTAACCTGGTGCGTTACGACGTCATCCACGCGCTGCCCAACACCGCCAACTCTCTGATCGGCCGCGCAGCTCACATCGCCGTCCTGGACTCTGAGATTTTCCTGGAAAAGTTCTTCCTGGTGGCAGGGCTCAAGTTTTTTCAGTAG
>TCONS_00012150
GTAGTATCTCAGGCTGACTTGGGATCAGTTTTACTGCTTGAACAGGAACTTGATGTGGAGGTCCGACTTCATGAGCTTTGTGAACAAGTCAAGCAGAAAGCAGAGAGCCCAGATGAGTTGGCTGAATTGGTGAACATGAATTTGGCGCAACTATGTTCCCTACTCATGGCTTTGTGGGGGAATTTCCTGGAAGTTGTGTCACTAAATGAGCGTGTTTTTGTGCTTTTGGCCCAGGAGCACCACACACTACGGgtGCAAAGATTTGCTGAAGCTTTCTTTTGTCTTGAACACCCACGACAGAGTGCACTGGCCTACCAGGAACTGCATGCTCACAGTCACCAACAAATGACCACAGCTATCAAAAGCTCTTCCTACTTCTTGTCCTTACCACCTCTTCCTGTTGAATGTGCTGATCTTGACGGGGATGTGAACTCCCTACCAATCATCTTTGAGGACAGATATTTGGAGTCTGTTACTGAAG

Function

symbol description
fam135a Predicted to be involved in cellular lipid metabolic process. Orthologous to human FAM135A (family with sequence similarity 135 member A).

GO:

id name namespace
GO:0044255 cellular lipid metabolic process biological_process
GO:0005575 cellular_component cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-080130-1 Predicted to be involved in cellular lipid metabolic process. Orthologous to human FAM135A (family with sequence similarity 135 member A).

Ensembl:

ensembl_id ENSDARG00000059843

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012148 False 5390 mRNA 0.48 22 39182099 39228382
TCONS_00012149 False 4017 mRNA 0.50 20 39188737 39227389
TCONS_00012150 True 481 mRNA 0.47 5 39208542 39214817

Neighbor

gene id symbol gene type direction distance location
XLOC_006169 col19a1 coding upstream 66136 38990939 ~ 39115963 (+)
XLOC_006168 col19a1 coding upstream 325943 38814521 ~ 38856156 (+)
XLOC_006167 adgrb3 coding upstream 588398 38430466 ~ 38593701 (+)
XLOC_006166 adgrb3 coding upstream 876951 38302665 ~ 38305148 (+)
XLOC_006165 NA coding upstream 897900 38226076 ~ 38284199 (+)
XLOC_006171 FRMD1 coding downstream 7759 39236141 ~ 39271505 (+)
XLOC_006172 si:dkey-85a20.4 coding downstream 48796 39277178 ~ 39323126 (+)
XLOC_006173 BX324188.1 coding downstream 96483 39324865 ~ 39337183 (+)
XLOC_006174 marveld1 coding downstream 303668 39532050 ~ 39533365 (+)
XLOC_006175 NA coding downstream 456089 39684471 ~ 39727464 (+)
XLOC_006163 BX322660.1 non-coding upstream 1031462 38150517 ~ 38150637 (+)
XLOC_006162 BX005106.1 non-coding upstream 1507805 37674178 ~ 37674294 (+)
XLOC_006160 NA non-coding upstream 1637778 37538653 ~ 37544321 (+)
XLOC_006149 NA non-coding upstream 3186932 35989155 ~ 35995167 (+)
XLOC_006176 NA non-coding downstream 616882 39845264 ~ 39873628 (+)
XLOC_006177 BX005216.1 non-coding downstream 740967 39969349 ~ 39969465 (+)
XLOC_006179 NA non-coding downstream 1099178 40327560 ~ 40330374 (+)
XLOC_006181 NA non-coding downstream 1131778 40360160 ~ 40419304 (+)

Expression


Co-expression Network