AMCG00017537


Basic Information

Item Value
gene id AMCG00017537
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 8815050 ~ 8834367 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017537
ATGCAGAGCCTGTACAATAAGCTAATAAatTTTCAGCTGAGCTCTCATCTTTCTACTCTGGCAAATATTCACAAGATTTACCACACCCTGAACAGGCTGAACCTGACGGAAGAAGTTAGCCAAGACGATCACCAGACAGGTAATGATGATGTTGTGGGTCCTGAGGGCATGGAAAAATTTTGTGAAGATATTGGAGTCGAACCTGAAAATGTTGTGATGCTGGTCCTGGCATGGAAGCTGGATGCACAGAACATGGGATACTTCACTCTGCAGGAGTGGTTGAAAGGAATGGGAGCTTTACAGTGTGACACAACAGAGAAGTTAAGAAATTCTTTAGACTATTTGAGATCGGTTCTGAACGAGTCGACAAATTTTAAGCTTATTTACAgatatgcatttgattttgcaCGGCaatcaaaatataaagtaataaacaAGGACCAATGGTGCAACGTTTTGGAGTTTAGCAGAACAATTAACCTCGACCTTAGCAACTACGATGAAGATGGGGCTTGGCCCGTCTTGCTGGATGAGTTTGTGGAATGGtataaagacagacagatgtcATAGCACTTAAAGAATGGCCTTTCACAAGCCACTCGAACAACGACTCTCTCATTTCCTCATTGGTTCCTGTCCATCCCAGGGTGCATGCTGCTTCTCTGCACTGTGTTCCACTCACCAGGGACATTGCTGTTCACTGTGCAGCCGGCCATCTCCACTTTAGTGAGACATTTGTTCTTCGACGGCCGTTTAGCATTTTGTATCGACACTACAAGCTAGTGGAGCCGCCAACATTCACACTGTGATGTGTATATTGctgtctgtattttgtaaatgtgtataaAGTTGCCTCATATGCAGAACAAGACGTTCAATTTCatgtaatgttaaaaaaagcTTACCATTTCAGTGAATCTTTGTTCTAAAACTAGGTCACTTCAACCAGGGCACATTGTCAAAAaccatttagttatttgttaAATCTGTGCTTTGAAATTTCTTTtggcaaaactttttttttttttgtattcctttttctGGATTGcatctctttaaaaatatactgtacttatgtcaaatagttttattttttggagtgTTTCttatcattttgtgttttttcgaTCGTTGCACAAAATTAGATCTCTGCTTGAGACAGGCTGCGCCGTCCCTCGGTGAGAGCCTTGCTTTTGTCTGAATGTAGGAAATGGCCGTTCCAGGCACATGGGATccctgtattgcactgtattcaGGGTCAGATGGTCACCTACCAAGCCAGGCTTCACTAAAGTATTTCATACCATGGTCAGGTTGCAGAGCATATGTTCTGTTTTTGGCATTCAGATATGTCCTGGTTTGAAACAAAGATATTGGGCTGCTGGTTGCCTTCTGCTCAGCAGCTTATCATTAAAAGACTGAGTGTTGGCAACATCCTACTGAAGCATAAAATCAACAAAGGGCAAAGTAGTAATTAAGGGAAGGACATTCAATGACAAGTCTTCAATGACTGATGAGGGAAAACCACCACAGGACGTGGTGTGTCTGTTTTGCCACGTTTCGAGTCAAGATGATCAGGACAGTGAAAGCTCAATCAACTTGCTATTCAATTCATGATGGAAAGTACAATTTATTTGCTAATGCTGGGACATGGAAAATATCAAACATCTCAGCAGTAATgctctctctttttccttttaagtaTGAATTGCTTATGTATTGTCATGATCAGTTTTTATTCTCGATTTATGATCCATTATGGTCAGTtacatatttattcaatatccagtataatttattttattttataggatGACATTTTTATCCGAAGtatcctactttttttttttataataaagataaagGATAAAgaaccttgctcaagggtatagCAGCATTTCACCTAGGGTTTAAAGTTAAGATTGGATTACATGGTATTTAAATGGTATATATAGACAAAATAATTCACCCTCCTGCATTGACTATGCAGTATAACAAGATGTACGTTATTATGAGTTAATGTACAAAAACTGCTCACATGCACGCACACTTATTCATACAAATGCATGAGAccagatttagtaaataaaaaatgacccAACCACATACACCTCGATAGCAGGTTTTCCTAATGGAGAGGGAAGAAGCTGTTgctacagaaaaatacatttcgtATTGGTGAGTTAGTTTTGATTTCGTCCTGGTCACAGTTCACCTCTGCCAAAATGATGGCTAGGTAATCGTTGGCACAAAGCACTGATCATCCCAGGAATAGAGACAGATTATGATCATTTATAGCAGAGTGTCCTGAAATGGTgatttgggggaaaaataaaaggtaaagGAGGGTGGCAGAAACATTTGGTACATGTTTGGTCTAAGTAACCAAGTAACTTCAGAATGATGAGTCTGAATTATTACGACCATACTTGAACAAGTAGAGCATCAATGGATGTAAACTGAGGTCCAACTTAAAcctgaattatgtattttgacTAGAGGTCTGATGAAATGTCCAAAAGTGGTGTTGTTCCTATAGTGGGAACCATAAACTAATGTGAAGATGCAAAGGAGAGCCATGAGTGAAACTCGTGGTGCCTACAGCACTGGGGACCGTTTCACCAAATTGTGGTGCCACCTCAACTCTGCAGGGACTGGAAGCCCTTGTGTGGCTGAGGGAAACCTGAATGCGTAAAAGGATTATGGCGCACCCCTGAATAAAACTGCACAGTTATAGGATCTCTGTGCGTTATCACTATAACAACTGTCTAAAGCTCACAGACAAGTGAATATAGAAGCAGTATCTTGTTTTATGTTATAtctatatttcaaaatgtgccCTTAAGTACGCTGTATATTCTTCACTTTGTTTATTCAGGAGAGTGAATTTCCCATGTATGATTTATCACTCATTGTTATGGTTCCGAATGATTTCCTATCGGTTATACCTTCATTTGGGTGGCACAAAATTAAAGaaagtttttgaaaatgaaagcgAAATGCTATATTATTTGGCTTTGATGGTGCAAGACATTGGCATCATATCATGAAGCCATATTATTGACTTATGTACCAAAGATTTTAGCATGAGCTGTAGCTGAAAATCAGTCCACCCAGGATTCTGTAAGCCTACAGAACTCTCTAGAAAATTATAAATACCCTTTTTTCCATTGGCAAAATTGAGTTAACGcatttctgttctgtgttttcagCTAAGGTCATATAAACGTATgtcattttaagtttttttgttgttttgttttatgttcatgTGATGATTGGTGGTGCTAAACTTGGCACGAAGCAGTTACTAATGTGAAGGTGGGAACTCTTAACTTGAACTGATTTCTGttcaactgtgtttttaaaactggAAATTCTTAGTCAATGTTTCATGGTGTGTGGAAGGTTTTAAGTGTACCGGCAATTTCAGCATATTCTATACCCTAGCTAGAACCTGTTAATCATCCTAATTTATTTGCATCggctttttaaagtttttaagcTTCAGACTAACTTAATAGTatcttttttcctgtttttgaatTCCGTGTCAAACTCGTATGTGTGGAGAGCTACTTGCAGGTAGCTGTACTGCCGCCACTTGTTATCCTGTGAAGAAGCTGTTACTTTCCACTTTAAAACCCATTTGTGGTGAACCCCCGTGCTTTTGACCTGCTGCAAGATTGTTGCTGTCCTGAAAGGAAGTGCAGAGAAGGCATGTGCAAGTGTTAAATGGATAATGAAGATCTATCACTTTTCTGCCAAACAAAACCAGCTGTTACCTCAGTAAGATCTGTCTTTAATAATGTAGAAAGCTGCTATTACTACACCTTGGGGCTTGTTAATGGTCCCTGCAGTTTTCACACTATCATCTAATCTTACATCTAGAGCCAAGAGAAATTACCAGTGAAACCGCCTCTCTCTGCACCCTCTCAAGACAACCAATACAGCAGAACTGTTGATTTCATTGATAAACTATAGTAGACTGCATAATATATTAactatttttgtgtgtgtttttttatcgAGTACCTTCCGGGCCAACATGGTGGTAACATGTCTATGGATGCATTCCAAAAGAATAATTCTGTATAATATACTTTTGTATAATACTAAAACCTACCAGGcttgatttaattattctgtTATGTATTGCCATTATTTTGCTcaaatttgttttagtttttatgttttttaataccccttttgttatatattttagtatACAAGAAAGCAAAATctggtaaaatgtaaaaaatatggtgcttgcatgtgtttatatattctatattaaCACCATGAGTATCCCACTAATGTTAGGTCTTCCATATTAGGAgtgtaaaaaacatttttgtaagaTGTGTACAGTTCTGAAATGCTTCATAtgg

Function

GO: NA

KEGG:

id description
K17824 DCUN1D4_5; DCN1-like protein 4/5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017537 True 4391 mRNA 0.38 8 8815050 8834367

Neighbor

gene id symbol gene type direction distance location
AMCG00017536 LOC107683324 coding downstream 16856 8790182 ~ 8798194 (-)
AMCG00017532 NA coding downstream 34829 8772209 ~ 8780221 (-)
AMCG00017528 NA coding downstream 84337 8701878 ~ 8730713 (-)
AMCG00017530 ppat,LOC106560282 coding downstream 120691 8679813 ~ 8694359 (-)
AMCG00017529 NA coding downstream 137237 8663650 ~ 8677813 (-)
AMCG00017535 NA coding upstream 2486 8836853 ~ 8843458 (-)
AMCG00017539 NA coding upstream 135824 8970191 ~ 8972241 (-)
AMCG00017540 slc10a4,LOC102785779 coding upstream 139248 8973615 ~ 8976665 (-)
AMCG00017541 NA coding upstream 142871 8977238 ~ 9013172 (-)
AMCG00017542 LOC107735811 coding upstream 186766 9021133 ~ 9034005 (-)
G91064 NA non-coding downstream 209424 8603621 ~ 8605626 (-)
G91016 NA non-coding downstream 433380 8289765 ~ 8381670 (-)
G91005 NA non-coding downstream 527933 8286889 ~ 8287117 (-)
G90992 NA non-coding downstream 585489 8229315 ~ 8229561 (-)
G90965 NA non-coding downstream 650145 8164654 ~ 8164905 (-)
G91294 NA non-coding upstream 760563 9594930 ~ 9595162 (-)
G91297 NA non-coding upstream 798278 9632645 ~ 9632859 (-)
G91298 NA non-coding upstream 828197 9662564 ~ 9662788 (-)
G91300 NA non-coding upstream 841179 9675546 ~ 9675779 (-)
G91301 NA non-coding upstream 843104 9677471 ~ 9680221 (-)
G91119 NA other downstream 59143 8755288 ~ 8755907 (-)
AMCG00017531 NA other downstream 66307 8732760 ~ 8748743 (-)
AMCG00017520 NA other downstream 300095 8473490 ~ 8514955 (-)
G90939 LOC105903575 other downstream 818455 7992137 ~ 7996595 (-)
G90937 NA other downstream 982458 7830885 ~ 7832592 (-)
AMCG00017556 NA other upstream 1526933 10361300 ~ 10497104 (-)
AMCG00017563 NA other upstream 2669657 11504024 ~ 11506820 (-)
AMCG00017569 NA other upstream 3042993 11877360 ~ 11900600 (-)
AMCG00017582 NA other upstream 3473414 12307781 ~ 12322370 (-)
AMCG00017631 NA other upstream 5598791 14433158 ~ 14484818 (-)

Expression


Co-expression Network