Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017549 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 9229000 ~ 9231753 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006915 | apoptotic process | biological_process |
| GO:0046328 | regulation of JNK cascade | biological_process |
| GO:0008270 | zinc ion binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017549 | True | 381 | mRNA | 0.62 | 2 | 9229000 | 9231753 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017547 | sh3rf1 | coding | downstream | 44254 | 9164861 ~ 9184746 (-) |
| AMCG00017546 | LOC107736140,LOC107682575 | coding | downstream | 72733 | 9150844 ~ 9156267 (-) |
| AMCG00017542 | LOC107735811 | coding | downstream | 194995 | 9021133 ~ 9034005 (-) |
| AMCG00017541 | NA | coding | downstream | 215828 | 8977238 ~ 9013172 (-) |
| AMCG00017540 | slc10a4,LOC102785779 | coding | downstream | 252335 | 8973615 ~ 8976665 (-) |
| AMCG00017548 | NA | coding | upstream | 13463 | 9245216 ~ 9285503 (-) |
| AMCG00017550 | nwd2 | coding | upstream | 110361 | 9342114 ~ 9372079 (-) |
| AMCG00017554 | NA | coding | upstream | 263975 | 9495728 ~ 9547314 (-) |
| AMCG00017555 | LOC106608544 | coding | upstream | 1255544 | 10487297 ~ 10496150 (-) |
| AMCG00017559 | NA | coding | upstream | 1715993 | 10947746 ~ 10948005 (-) |
| G91064 | NA | non-coding | downstream | 623374 | 8603621 ~ 8605626 (-) |
| G91016 | NA | non-coding | downstream | 847330 | 8289765 ~ 8381670 (-) |
| G91005 | NA | non-coding | downstream | 941883 | 8286889 ~ 8287117 (-) |
| G90992 | NA | non-coding | downstream | 999439 | 8229315 ~ 8229561 (-) |
| G90965 | NA | non-coding | downstream | 1064095 | 8164654 ~ 8164905 (-) |
| G91294 | NA | non-coding | upstream | 363177 | 9594930 ~ 9595162 (-) |
| G91297 | NA | non-coding | upstream | 400892 | 9632645 ~ 9632859 (-) |
| G91298 | NA | non-coding | upstream | 430811 | 9662564 ~ 9662788 (-) |
| G91300 | NA | non-coding | upstream | 443793 | 9675546 ~ 9675779 (-) |
| G91301 | NA | non-coding | upstream | 445718 | 9677471 ~ 9680221 (-) |
| G91119 | NA | other | downstream | 473093 | 8755288 ~ 8755907 (-) |
| AMCG00017531 | NA | other | downstream | 480257 | 8732760 ~ 8748743 (-) |
| AMCG00017520 | NA | other | downstream | 714045 | 8473490 ~ 8514955 (-) |
| G90939 | LOC105903575 | other | downstream | 1232405 | 7992137 ~ 7996595 (-) |
| G90937 | NA | other | downstream | 1396408 | 7830885 ~ 7832592 (-) |
| AMCG00017556 | NA | other | upstream | 1129547 | 10361300 ~ 10497104 (-) |
| AMCG00017563 | NA | other | upstream | 2272271 | 11504024 ~ 11506820 (-) |
| AMCG00017569 | NA | other | upstream | 2645607 | 11877360 ~ 11900600 (-) |
| AMCG00017582 | NA | other | upstream | 3076028 | 12307781 ~ 12322370 (-) |
| AMCG00017631 | NA | other | upstream | 5201405 | 14433158 ~ 14484818 (-) |
