AMCG00017551


Basic Information

Item Value
gene id AMCG00017551
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 9257206 ~ 9372195 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017551
ATGGCCAGAGCCACTGCCCTTCGCTTTAACAACACCAGGCGGAGGATCGACAGCATCAGGATTGCGGGCAACTTCTTCCAGTATCTCAGTTTCCAGGTCCTCTGGTTCTGTACAAAACCCGACAAGAGACAGGTCTTCAGTGACAAAAGCACAAGGATATCGCAGCACGACAAATTGTTCCTTCAACACGGCAGCTCGAGTCTTTGCTTGGGCCTGCAGTTCAGTCATCAGGATCAGGGAGACGAGCTGCAGCAGCCCCGTTGGGCAGTACTGGTCCCGCAGCTGCTGGCACGCCCCTTTTACACAAGGACAATGGCACACCTTTCACACAGAGCCATTCTCACAATGTGCATGGAGAGCAGGCTGAGATGGCTGAGGCCGAGGTTACCTGAGCAGAACGTGTCCCCCGGCCTTCACAGCgtccttctgctgctgctgcttctgcacTTGGTCCAGGGCAGCGTGACACTGTTCATGCCTTACCTTTCGCTCTGGACTGCCTCCACCCCCACTGGAGCTGAGCACGTGCCTCCAGCCCTGCTCTCGAGCTCGGTTGATGCGATTCAGCTGGCGAGAGAACTGAAGATGACTGCAGGCAACACCACACACACGGACCGAAGCCCCGAGTACGTTGGCTTTGCCCTGGTGCCCATCTGCTTCCTACTAGGTCTCATTGGAGTCTTAATCTGTCATGTTTTAAAGCGCAAGGGATACCGCTGCACGACAGAATCTGAAGAAGTGATTGAAGATGTGAAAGATCCTGAGGAAATGAAAGagatgAATGATACCTTCAGCGAATGTAATGCTGACACGATGCTGATGCCCTGTTTCGACAGCCCAACCACTCCAATCACGCCTTTCACGCCAGCATCCCCCCTCACACCTGTGGCAGTCGCCAGCCCTGCCAAGCACACCTGCCAAGGTAACCATCTGCACACCGTTGGTGGGGTGGCCGAGAAGAGCGTATGCTCGCGGTGCACCAACAAGAGATGGACCCCAATGCGCCAGGCCGGCAAGGTGAAAGAACACAGGAAGAGTAATGCCACAGAAGTCACCGTCCTCTCTGTGGGGAGGTTCAGGGTGACAAAAAGTGAAACCAGGAACCGGAAAGACAGGAAATCTGTTCAGTCCGATTCAGAGGACGGGAGAACCAATGCAAATGGGGCCGCCTCTCCTTCTCCGACATCAGAGCAACCAAAGAGCAGATCAACGTCGTTGTCACAGGTTCTCCTGGCACTCTTACCGTCCGGGTTGGCGCTGATGAAGATGCGCACAGTCCTGCCGGTCGGGACGTGGTGCGGAGAGATGCCCAGCACATTCCCGCTGAGGGCCGCCCTGCGGAGCGCGGAGTCCCGGGGACAGGACGCCCTGCTACCGGCTCCCGTCGGCCACATGAGCGGCGGCTTCCAGCGCAGCGCTGAACATACAGAAACGGGTCTGATCAACCCAGCCGCGTCCCCTGACAGCGTCAGCGGCAACAGCGAGCCATGTGTGCGCGACTGGCCAGCGGGCTGCTCTAGTCACTGCAGTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017551 True 1533 mRNA 0.57 10 9257206 9372195

Neighbor

gene id symbol gene type direction distance location
AMCG00017545 NA coding upstream 109867 9127763 ~ 9147339 (+)
AMCG00017544 NA coding upstream 154003 9086577 ~ 9103203 (+)
AMCG00017543 NA coding upstream 236164 9017879 ~ 9021042 (+)
AMCG00017538 fryl coding upstream 287728 8869114 ~ 8969478 (+)
AMCG00017534 NA coding upstream 448212 8807015 ~ 8808994 (+)
AMCG00017553 NA coding downstream 258206 9630401 ~ 9668976 (+)
AMCG00017552 NA coding downstream 521033 9893228 ~ 9895433 (+)
AMCG00017560 NA coding downstream 2017994 11390189 ~ 11402671 (+)
AMCG00017561 NA coding downstream 2135681 11507876 ~ 11525014 (+)
AMCG00017562 fbxl5,LOC106674637 coding downstream 2494970 11867165 ~ 11879473 (+)
G91151 NA non-coding upstream 416168 8838647 ~ 8841038 (+)
G91135 NA non-coding upstream 432369 8819713 ~ 8824837 (+)
G91128 NA non-coding upstream 473117 8783867 ~ 8784089 (+)
G91104 NA non-coding upstream 524574 8732368 ~ 8732632 (+)
G91004 NA non-coding upstream 970478 8286292 ~ 8286728 (+)
G91307 NA non-coding downstream 794335 10166530 ~ 10166747 (+)
G91310 NA non-coding downstream 925207 10297402 ~ 10297808 (+)
G91329 NA non-coding downstream 1195983 10568178 ~ 10568428 (+)
G91334 NA non-coding downstream 1367908 10740103 ~ 10764336 (+)
G91339 NA non-coding downstream 1417403 10789598 ~ 10789889 (+)
AMCG00017527 tkfc,LOC107731922,LOC107095500 other upstream 492303 8751713 ~ 8764903 (+)
AMCG00017526 paics,LOC107555752 other upstream 556452 8687697 ~ 8700754 (+)
G90955 NA other upstream 1124352 8132368 ~ 8132854 (+)
AMCG00017508 NA other upstream 1443567 7806378 ~ 7813639 (+)
G90881 NA other upstream 1563859 7692585 ~ 7693347 (+)
G91281 LOC103376870 other downstream 147578 9519773 ~ 9583280 (+)
G91452 cc2d2a other downstream 2507419 11879614 ~ 11880499 (+)
AMCG00017600 NA other downstream 3824700 13196895 ~ 13259760 (+)
AMCG00017615 sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 other downstream 4409071 13781266 ~ 13830819 (+)
AMCG00017620 htra3,LOC106577909 other downstream 4653441 14025636 ~ 14039063 (+)

Expression


Co-expression Network