AMCG00017552


Basic Information

Item Value
gene id AMCG00017552
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 9893228 ~ 9895433 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017552
ATGATTGTCAACGTGAAAGCCTCAGTAGATGGAGCTACTCCTGAATTTGTGTTCCTGGAGCTGGTTGAGCTGGAGAGCCAAAGGGCAGAGCATATAGAAGAAGCTCTACTTAACTGTTTGGACACTGCAGGCTTCAGTGAAGAGTGGCTTAAAAAGAACTGGGTCTCATTTGTTTCTGATGGAGCCAGTGTCATGTTAGGTAAGAACTCTGGTGTGGCAACCAGGCTGACTGCAAGGTACCCTAACCTCTTCACATGGCACTGCATGAACCACCGTTTGGAACTGGCTATATCTGATGCTGTGGATGAGGTTCAGGCAGTCAACCACTTCAAAGCGTTCATGGAGAAGATCCACAATCTCTACAGTAGGTCCAATAAAAATTCACGGGAGCATCTGGAAGCAGCGCAAGAAGTGGGCTCACAAGTCCTGAAAATTGGCAGAGTTTTAATGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017552 True 453 mRNA 0.47 2 9893228 9895433

Neighbor

gene id symbol gene type direction distance location
AMCG00017553 NA coding upstream 224252 9630401 ~ 9668976 (+)
AMCG00017551 NA coding upstream 521033 9257206 ~ 9372195 (+)
AMCG00017545 NA coding upstream 745889 9127763 ~ 9147339 (+)
AMCG00017544 NA coding upstream 790025 9086577 ~ 9103203 (+)
AMCG00017543 NA coding upstream 872186 9017879 ~ 9021042 (+)
AMCG00017560 NA coding downstream 1494756 11390189 ~ 11402671 (+)
AMCG00017561 NA coding downstream 1612443 11507876 ~ 11525014 (+)
AMCG00017562 fbxl5,LOC106674637 coding downstream 1971732 11867165 ~ 11879473 (+)
AMCG00017577 NA coding downstream 2128823 12024256 ~ 12024505 (+)
AMCG00017578 NA coding downstream 2129100 12024533 ~ 12029958 (+)
G91151 NA non-coding upstream 1052190 8838647 ~ 8841038 (+)
G91135 NA non-coding upstream 1068391 8819713 ~ 8824837 (+)
G91128 NA non-coding upstream 1109139 8783867 ~ 8784089 (+)
G91104 NA non-coding upstream 1160596 8732368 ~ 8732632 (+)
G91004 NA non-coding upstream 1606500 8286292 ~ 8286728 (+)
G91307 NA non-coding downstream 271097 10166530 ~ 10166747 (+)
G91310 NA non-coding downstream 401969 10297402 ~ 10297808 (+)
G91329 NA non-coding downstream 672745 10568178 ~ 10568428 (+)
G91334 NA non-coding downstream 844670 10740103 ~ 10764336 (+)
G91339 NA non-coding downstream 894165 10789598 ~ 10789889 (+)
G91281 LOC103376870 other upstream 309948 9519773 ~ 9583280 (+)
AMCG00017527 tkfc,LOC107731922,LOC107095500 other upstream 1128325 8751713 ~ 8764903 (+)
AMCG00017526 paics,LOC107555752 other upstream 1192474 8687697 ~ 8700754 (+)
G90955 NA other upstream 1760374 8132368 ~ 8132854 (+)
AMCG00017508 NA other upstream 2079589 7806378 ~ 7813639 (+)
G91452 cc2d2a other downstream 1984181 11879614 ~ 11880499 (+)
AMCG00017600 NA other downstream 3301462 13196895 ~ 13259760 (+)
AMCG00017615 sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 other downstream 3885833 13781266 ~ 13830819 (+)
AMCG00017620 htra3,LOC106577909 other downstream 4130203 14025636 ~ 14039063 (+)
G92046 NA other downstream 5181892 15077325 ~ 15084278 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000140_02095891_02110510 NA coding CI01000140 null 2095630 ~ 2110984 (-)