AMCG00017571


Basic Information

Item Value
gene id AMCG00017571
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 11531110 ~ 11536385 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017571
ATGGCTCCTCGATCCAAGCACGGGGATGCTTCTACAGAAGTATCCAAAGACAACTCCTTTCCTCAAGAACTCAGtgACAATGTGGGGGGCACACCAAAGGAGCCAGTGATTCTGCCAGCCTATTCCACTGTGGCATTGATAGAAGACACAGCAGACGATCCCTGGGCCCTTCCCGAACTTCAGAGTACTGGACTCAAGTGGTCAGGTAGGAAGAGCCATGTGCTTCACTTCATTGTGTGTGAATTGGACACCAAGGGCAAGATCCTCCGGGTTTTGATTTCCATTGCcaaattttttttattgcttggaTTCCTATACATGTTTGTCTGCTCTTTGGATATCCTGAGTTCAGCTTTCCAACTTGTAGGagGGAAAGCCGCTGGGGACATTTTTCAAGATAACGCGATCTTGTCTAATCCCGTGGCTGGACTTGTGATTGGAGTTTTGGTGACAGTTATGGTTCAGAGTTCCAGCACCTCCTCCTCGATTGTGGTTAGCATGGTGTCCTCTGGGTTGTTGGATGTCCGGTCGGCCATTCCTGTTATCATGGGGGCAAACATCGGCACCTCTGTCACCAACACTATCGTTGCTATGATGCAAGCTGGGGACAGGAATGAGTTTCGGAGGGCCTTTGCCGGAGCCACTGTTCACGACTTCTTTAACTGGCTGTCAGTGCTGGTGTTATTGCCTCTCGAAGTTGCCACTGGTTACCTGTTCCGTCTCACACAGCTGCTCATAGATTCATTTAACCTCGAAACTGGGGAAGACGCCCCTGACCTACTTAAAGTTATCACCGATCCCTTAACGAAGATAATCATTCAGcttGACAAATCTGTTATCAACGAAATTGCCACGGGTGACCTTGCAGCAAGGAACAAAAGTCTGATCAAAATCTGGTGTAAAACTTTTACAAATATGACTGAAATGAATGTAACAGTGCCTGGGATTGACAACTGCACATCTCCTAGCCTTTGCTGGACAGACGGCAATTTGACATGGACCCTGAAAAATATTTCGGaaaaatttaatttagaaaaatGTAATCACATTTTTGTGAATAGCAATCTGCCCGATCTGGCTGTGGGCCTCATCCTTCTCGCCCTGTCCTTGTTTGTGCTCTGCACCTGCTTGATTCTCATCGTGAAGTTGCTTAATTCAATGCTGAAGGGACAAGTGGCTGTCGTCATTAAAAAGATTCTCAACACAGATTTTCCGTTCCCCTTCGCCTGGGTGACTGGATATATTGCCATGGTTGTTGGGGCAGGGATGACTTTCATAGTCCAAAGTAGCTCAGTGTTCACCTCAGCTATTACCCCTCTTGTTGGCATTGGTGTCATAAGCATTGAAAGAGCTTACCCACTCACCTTGGGGTCAAATATTGGTACCACCACGACAGCTATTTTGGCTGCCATGGCAAGTCCAGGAGAAACACTTGGCAACTCATTGCAGATTGCTCTGTGTCACTTCTTTTTCAACATCTCTGGGATCCTGCTATGGTATCCAATCCCCATCACGCGTGTTCCTATACGCCTGGCCAAAACTCTGGGTGATCGCACCGCTAAGTACAGGTGGTTTGCCGTCATGTACTTGGTTTTATGTTTCTTAATCCTGCCTCTAACTGTGTTCGGGCTTTCCGTAGCCGGGTGGCAGGTTCTGGTTGGAGTTGGCGTGCCAGTCATTGTGATCTTCTTGGTTGCTATTTTCATCAATGTCATGCAGTCCAAGTGGCCACAGTACCTGCCCAAGGTACTGCAGACCTGGGACTTCCTCCCTTTGTGGATGCACTCTCTCAAGCCCTGGGACAGGATTGTCACGTCTGTCATGGCCTTCTGTGGAGCTCgcgtctgctgctgctgcaagtgctgtaaaaaaaatagcagTGAAGAGGAGGGAACTGGTGAGAAGAAGACAGGGTCCCTTGAAATGTATGACAATCCAGCATTGGAATGCTCTCCTGAAACCTGTGAAGATAGTCAGGATGAtacactgaaaaacactgaacaaaCCAGCCAAACCACTCCCAAAACAACTAATTTGTAA

Function

GO: NA

KEGG:

id description
K14683 SLC34A, NPT, nptA; solute carrier family 34 (sodium-dependent phosphate cotransporter)

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017571 True 2040 mRNA 0.47 12 11531110 11536385

Neighbor

gene id symbol gene type direction distance location
AMCG00017566 rbpj,LOC106577485 coding downstream 107165 11414328 ~ 11423945 (-)
AMCG00017572 LOC108228807 coding downstream 143698 11356805 ~ 11387412 (-)
AMCG00017557 stim2 coding downstream 215310 11293608 ~ 11315800 (-)
AMCG00017558 NA coding downstream 581401 10948110 ~ 10949709 (-)
AMCG00017559 NA coding downstream 583105 10947746 ~ 10948005 (-)
AMCG00017570 prdm5,LOC106560247 coding upstream 206099 11742484 ~ 11770097 (-)
AMCG00017564 ndnf coding upstream 249255 11785640 ~ 11796072 (-)
AMCG00017573 NA coding upstream 266258 11802643 ~ 11810656 (-)
AMCG00017574 NA coding upstream 307096 11843481 ~ 11851614 (-)
AMCG00017567 LOC108240206 coding upstream 368453 11904838 ~ 11907394 (-)
G91381 NA non-coding downstream 133379 11397520 ~ 11397731 (-)
G91371 NA non-coding downstream 239876 11290328 ~ 11291234 (-)
G91362 NA non-coding downstream 242947 11287855 ~ 11288163 (-)
G91359 NA non-coding downstream 262515 11268106 ~ 11268595 (-)
G91355 NA non-coding downstream 379412 11151378 ~ 11151698 (-)
G91466 NA non-coding upstream 291623 11828008 ~ 11829693 (-)
G91467 NA non-coding upstream 295048 11831433 ~ 11833898 (-)
G91539 NA non-coding upstream 805057 12341442 ~ 12341735 (-)
G91553 NA non-coding upstream 959906 12496291 ~ 12499947 (-)
G91556 wdr1,LOC107717326,LOC106583413 non-coding upstream 970242 12506627 ~ 12509143 (-)
AMCG00017563 NA other downstream 24290 11504024 ~ 11506820 (-)
AMCG00017556 NA other downstream 1034006 10361300 ~ 10497104 (-)
G91119 NA other downstream 2775203 8755288 ~ 8755907 (-)
AMCG00017531 NA other downstream 2782367 8732760 ~ 8748743 (-)
AMCG00017520 NA other downstream 3016155 8473490 ~ 8514955 (-)
AMCG00017569 NA other upstream 340975 11877360 ~ 11900600 (-)
AMCG00017582 NA other upstream 771396 12307781 ~ 12322370 (-)
AMCG00017631 NA other upstream 2896773 14433158 ~ 14484818 (-)
AMCG00017638 scoc,LOC103463814,LOC103132857 other upstream 3223683 14760068 ~ 14764832 (-)
G92124 LOC101154678 other upstream 4330562 15866947 ~ 15867647 (-)

Expression


Co-expression Network