Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017578 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 12024533 ~ 12029958 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017578 | True | 288 | mRNA | 0.50 | 2 | 12024533 | 12029958 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017577 | NA | coding | upstream | 28 | 12024256 ~ 12024505 (+) |
| AMCG00017562 | fbxl5,LOC106674637 | coding | upstream | 145060 | 11867165 ~ 11879473 (+) |
| AMCG00017561 | NA | coding | upstream | 499519 | 11507876 ~ 11525014 (+) |
| AMCG00017560 | NA | coding | upstream | 621862 | 11390189 ~ 11402671 (+) |
| AMCG00017552 | NA | coding | upstream | 2129100 | 9893228 ~ 9895433 (+) |
| AMCG00017575 | NA | coding | downstream | 69032 | 12098990 ~ 12118066 (+) |
| AMCG00017576 | LOC106589762 | coding | downstream | 99705 | 12129663 ~ 12130950 (+) |
| AMCG00017581 | rab28,LOC106600633 | coding | downstream | 118311 | 12148269 ~ 12158241 (+) |
| AMCG00017580 | rab28,LOC107717319 | coding | downstream | 143886 | 12173844 ~ 12178118 (+) |
| AMCG00017585 | NA | coding | downstream | 363322 | 12393280 ~ 12397753 (+) |
| G91490 | NA | non-coding | upstream | 48921 | 11975409 ~ 11975612 (+) |
| G91481 | NA | non-coding | upstream | 88194 | 11936101 ~ 11936339 (+) |
| G91480 | LOC107549164,LOC106560248,LOC106584219 | non-coding | upstream | 88572 | 11935627 ~ 11935961 (+) |
| G91387 | NA | non-coding | upstream | 607793 | 11416521 ~ 11416740 (+) |
| G91386 | LOC106577485 | non-coding | upstream | 609431 | 11408294 ~ 11415102 (+) |
| G91545 | NA | non-coding | downstream | 405786 | 12435744 ~ 12435984 (+) |
| G91549 | NA | non-coding | downstream | 460125 | 12490083 ~ 12490296 (+) |
| G91597 | NA | non-coding | downstream | 677352 | 12707310 ~ 12710716 (+) |
| G91619 | NA | non-coding | downstream | 835229 | 12865187 ~ 12891356 (+) |
| G91649 | NA | non-coding | downstream | 1029898 | 13059856 ~ 13060646 (+) |
| G91452 | cc2d2a | other | upstream | 144034 | 11879614 ~ 11880499 (+) |
| G91281 | LOC103376870 | other | upstream | 2441253 | 9519773 ~ 9583280 (+) |
| AMCG00017527 | tkfc,LOC107731922,LOC107095500 | other | upstream | 3259630 | 8751713 ~ 8764903 (+) |
| AMCG00017526 | paics,LOC107555752 | other | upstream | 3323779 | 8687697 ~ 8700754 (+) |
| G90955 | NA | other | upstream | 3891679 | 8132368 ~ 8132854 (+) |
| AMCG00017600 | NA | other | downstream | 1166937 | 13196895 ~ 13259760 (+) |
| AMCG00017615 | sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 | other | downstream | 1751308 | 13781266 ~ 13830819 (+) |
| AMCG00017620 | htra3,LOC106577909 | other | downstream | 1995678 | 14025636 ~ 14039063 (+) |
| G92046 | NA | other | downstream | 3047367 | 15077325 ~ 15084278 (+) |
| AMCG00017651 | NA | other | downstream | 3058174 | 15088132 ~ 15090829 (+) |
