Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017579 |
| gene name | bod1l1 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 12092470 ~ 12097269 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| bod1l1 | Predicted to enable protein phosphatase 2A binding activity and protein phosphatase inhibitor activity. Predicted to be involved in negative regulation of phosphoprotein phosphatase activity. Predicted to act upstream of or within cell division. Predicted to be located in chromosome; cytoplasm; and cytoskeleton. Predicted to be part of outer kinetochore. Predicted to be active in centrosome; spindle microtubule; and spindle pole. Orthologous to human BOD1L1 (biorientation of chromosomes in cell division 1 like 1). |
| description |
|---|
| PREDICTED: biorientation of chromosomes in cell division protein 1-like 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017579 | True | 1173 | mRNA | 0.52 | 6 | 12092470 | 12097269 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017565 | NA | coding | downstream | 118786 | 11955414 ~ 11973684 (-) |
| AMCG00017568 | cpeb2 | coding | downstream | 153937 | 11933251 ~ 11938533 (-) |
| AMCG00017567 | LOC108240206 | coding | downstream | 185076 | 11904838 ~ 11907394 (-) |
| AMCG00017574 | NA | coding | downstream | 240856 | 11843481 ~ 11851614 (-) |
| AMCG00017573 | NA | coding | downstream | 281814 | 11802643 ~ 11810656 (-) |
| AMCG00017587 | drd5 | coding | upstream | 567262 | 12664531 ~ 12665835 (-) |
| AMCG00017589 | otop1,LOC106583410 | coding | upstream | 573839 | 12671108 ~ 12677683 (-) |
| AMCG00017591 | NA | coding | upstream | 585157 | 12682426 ~ 12688515 (-) |
| AMCG00017588 | NA | coding | upstream | 607189 | 12704458 ~ 12710164 (-) |
| AMCG00017590 | NA | coding | upstream | 632762 | 12730031 ~ 12739099 (-) |
| G91467 | NA | non-coding | downstream | 258572 | 11831433 ~ 11833898 (-) |
| G91466 | NA | non-coding | downstream | 262777 | 11828008 ~ 11829693 (-) |
| G91381 | NA | non-coding | downstream | 694739 | 11397520 ~ 11397731 (-) |
| G91371 | NA | non-coding | downstream | 801236 | 11290328 ~ 11291234 (-) |
| G91362 | NA | non-coding | downstream | 804307 | 11287855 ~ 11288163 (-) |
| G91539 | NA | non-coding | upstream | 244173 | 12341442 ~ 12341735 (-) |
| G91553 | NA | non-coding | upstream | 399022 | 12496291 ~ 12499947 (-) |
| G91556 | wdr1,LOC107717326,LOC106583413 | non-coding | upstream | 409358 | 12506627 ~ 12509143 (-) |
| G91562 | wdr1,LOC106565198 | non-coding | upstream | 419811 | 12517080 ~ 12521214 (-) |
| G91576 | NA | non-coding | upstream | 558800 | 12656069 ~ 12656333 (-) |
| AMCG00017569 | NA | other | downstream | 191870 | 11877360 ~ 11900600 (-) |
| AMCG00017563 | NA | other | downstream | 585650 | 11504024 ~ 11506820 (-) |
| AMCG00017556 | NA | other | downstream | 1595366 | 10361300 ~ 10497104 (-) |
| G91119 | NA | other | downstream | 3336563 | 8755288 ~ 8755907 (-) |
| AMCG00017531 | NA | other | downstream | 3343727 | 8732760 ~ 8748743 (-) |
| AMCG00017582 | NA | other | upstream | 210512 | 12307781 ~ 12322370 (-) |
| AMCG00017631 | NA | other | upstream | 2335889 | 14433158 ~ 14484818 (-) |
| AMCG00017638 | scoc,LOC103463814,LOC103132857 | other | upstream | 2662799 | 14760068 ~ 14764832 (-) |
| G92124 | LOC101154678 | other | upstream | 3769678 | 15866947 ~ 15867647 (-) |
| G92129 | NA | other | upstream | 3933133 | 16030402 ~ 16030905 (-) |
