AMCG00017588


Basic Information

Item Value
gene id AMCG00017588
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 12704458 ~ 12710164 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017588
AGTATCGGTGTGCTTTTCCATCGTACTTGTCTTCAGTATGGTTTTCTTCACCTGCAATGCATGTGGGGAGTCTCTGAAGAAGGGCCAAGTCGACAAGCATGTAAGTGTGTGTAGGAGCTGCCAGAGCTTGTCCTGCATCGACTGTGGTAAAGACTTCTGGGGTGATGATTACAAAAATCATGTCAAGTGCATAACTGAAGATCAAAAGTATGGAGGGAAAGGCTATGAAGCCAAGAGTAACAAAGGAGACGTGAAGCAGCAGCAATGGATTCAGAAAATTCACGAAGCAATGAATAAACCAGGGATAAGTCCAAAATTACGTGAGGTACTGCAGCAGGTGAGCTCCTACGACAATGTTCCtcggaaaaaaggaaaattccAGAACTGGATGAAGAACAGTTTAAAGCTCAATAACCAAGCTTTGCAAGACCAGGTGTGGGACATTTTTTCAACAGCAACAAGCAGTGAGCCCAGCCAGCCCCAGAAGTGCACAAACAGTCAGCCAGATgagagtgaagaaaaaaacCAGGCCTCTGTGACCGAGGAGAAGGCCCCgtcaaaagagaagaaaaagaacaagcGGGAGCGTAAAGAAGAAaggcagaaaaagaacaagaaagagaagaaaacattgagGCTGGAAAGCCAAGAGGAAGCTGAAGATGATGACCAGGTCCCAATGCATGAGGCTAAAGGCGAGAATGGGACAGAAAATGGCCATGGCCTCGAAGATGTGACAACGAGCAAGAAGTGCAAGAAACGTAAACACGACAATTTGGAAGAAAATCCCAAATCCAAGCAGATGAAGGTTGAaatggatgatgatgatgatgtagaTGATGCcgagggcgagagagagaacaaagGCAAATTCAATTGGAAAGGAActattaaatctattttaaaacaatcccCGGAAGAGggcatttcaataaaaaagcTCAGAAAGAAGgTTCTAGCAGCGTATTATACCGTTAGTGGGGAAGATAATCACAAAACTGAGGAAGCGCTCTTCTCCCTGTTCAACAAGAAAATCCACTGCAATCCCAAGTTTAgagttttgaaagaaaaagtcaaGCTTGTGCAGTAATGTTTCCGCTTCCTCTCGGCAGTCTTTTGTTACACATTCAGAATGATTACACATCTTTGATATTTCCTGTTAACCAAAATTGGAACACTTGTAAATGAATCTTCTGAGATATAACGCGcagccttttttaaataaatgttctttagCAAAATACTTAGTTATGAAATCCGCTGTATGTAcgtagtttttattattttaaaatatgcagaaaGCAGCATTAATTATTCCGCTATACTAATTTCCCATTGTTTTTTGAATTTTTAATTAGACATTTACTTTTCCACAGATTTGTTTGAATAAACGATTTAATCAGGGCGTATTGTTCCAGTGTCCGAATAGGATGATATTAAGAGCTGAATCTGAGGATTGGATGAACTCCGATGCACTGATGACTAGAAATGAAACTGATTAAACAGGGACTATCAGACTAAGGTGGAATGTGAGAAGCTTACAGAATAGAAGTAGGTCCTACAAGGGCAGACACACGGTACACAACCTCTCTGCCAATATTTTCTTTCCCACTGAATCTAGGTTATCTTTGTCATTAGTCCTTGTATGtaggcttctctctctctctctctctctctctctctctctctctcatatatatatatataaaataatgcacattcttgcttttacatttggaTTGTATAGGTGTTTTttgaaaattgttttaatttgggtAAAGGAGAAGACtagacaaaaaatatacattactttGTCATAACTAAACAGGAAATGCTTTGCctttaatattttctgaatgAGGAAGGATTTGAGTGAGTTTGAAACTTAAGATAACATTTCTTCACGGATTAATTGTTTAAGGACTAAGTAAACTCAGGGTGAATTTGACACTTGCGTGGAGCAGACTAATGCACATTCCACGGCACCCTGAACACTGTGCAGTTGGCTGGGTACACAGAAGCCCTATACAGGTACATTTGTGAATCCAGAGCAAGACTCTGGTGTTAAAGTCTGATTGAATTTTAATGCTGTCTGATTCCTTGGGAGAATAAATAGCCTgttacccac

Function

GO: NA

KEGG:

id description
K15263 LYER; cell growth-regulating nucleolar protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017588 True 2128 mRNA 0.40 8 12704458 12710164

Neighbor

gene id symbol gene type direction distance location
AMCG00017591 NA coding downstream 15943 12682426 ~ 12688515 (-)
AMCG00017589 otop1,LOC106583410 coding downstream 26775 12671108 ~ 12677683 (-)
AMCG00017587 drd5 coding downstream 38623 12664531 ~ 12665835 (-)
AMCG00017579 bod1l1 coding downstream 607189 12092470 ~ 12097269 (-)
AMCG00017565 NA coding downstream 730774 11955414 ~ 11973684 (-)
AMCG00017590 NA coding upstream 19867 12730031 ~ 12739099 (-)
AMCG00017594 NA coding upstream 180028 12890192 ~ 12892560 (-)
AMCG00017598 NA coding upstream 251822 12961986 ~ 13061226 (-)
AMCG00017602 LOC107742497 coding upstream 369967 13080131 ~ 13105870 (-)
AMCG00017605 NA coding upstream 396841 13107005 ~ 13142072 (-)
G91576 NA non-coding downstream 48125 12656069 ~ 12656333 (-)
G91562 wdr1,LOC106565198 non-coding downstream 183244 12517080 ~ 12521214 (-)
G91556 wdr1,LOC107717326,LOC106583413 non-coding downstream 195315 12506627 ~ 12509143 (-)
G91553 NA non-coding downstream 204511 12496291 ~ 12499947 (-)
G91539 NA non-coding downstream 362723 12341442 ~ 12341735 (-)
G91850 NA non-coding upstream 1333957 14044121 ~ 14044527 (-)
G92006 NA non-coding upstream 2089926 14800090 ~ 14800401 (-)
G92024 NA non-coding upstream 2214229 14924393 ~ 14925960 (-)
G92049 NA non-coding upstream 2344299 15054463 ~ 15054684 (-)
G92050 NA non-coding upstream 2345128 15055292 ~ 15056623 (-)
AMCG00017582 NA other downstream 382088 12307781 ~ 12322370 (-)
AMCG00017569 NA other downstream 803858 11877360 ~ 11900600 (-)
AMCG00017563 NA other downstream 1197638 11504024 ~ 11506820 (-)
AMCG00017556 NA other downstream 2207354 10361300 ~ 10497104 (-)
G91119 NA other downstream 3948551 8755288 ~ 8755907 (-)
AMCG00017631 NA other upstream 1722994 14433158 ~ 14484818 (-)
AMCG00017638 scoc,LOC103463814,LOC103132857 other upstream 2049904 14760068 ~ 14764832 (-)
G92124 LOC101154678 other upstream 3156783 15866947 ~ 15867647 (-)
G92129 NA other upstream 3320238 16030402 ~ 16030905 (-)
AMCG00017663 NA other upstream 4677320 17387484 ~ 17395049 (-)

Expression


Co-expression Network