AMCG00017598


Basic Information

Item Value
gene id AMCG00017598
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 12961986 ~ 13061226 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017598
ATGCGGGTTCATGCCGTGCTCACAGTGTTGGGCATCGCATCCCTCTATGGGCCAGCGCCATCCAGAGCAGAGGGGGGATGCCAGCCTTGCTTGTCTGAGTCCAGTCCTGCACAGATTCGAAGTCTGACGAAAGCTTACAGTTTTGGACTCACATTTCATAAATGTGCAcagAATGATATTAACTTGTTTGGTCCTTTGGTTGCAAATTTTACTCTGAGACTGAATTCAACGGAGAAGAGAAACAGAAGTGAAGTTAATGGAGAAACCAACCATGAGCTTGCTATATGTAACATAAATGAGACATCCAAAGAAGAGGCAGCTTTTGAAGACAAGATTGTTGACATTATGGTGTTGGAAGATCCTCAGAACATGTATCAGGCCTTAGAAAATTTGGATATGTCAAACCTGCTGCGAGCTGCAGCCAGTTTAGAAAGCTACCGAGTCCAGGTTTACAAAGATGTCATTGCCAAGCTTCTGAGGAATCTGAAGATTAATGGTGATGTCTCCGCACTGGCTGAGAAGAGGCTGACCAGCGTGCTGAACGGGCAGCTGATGGGCATGGAGGGCAAGCTGAAGGAGGAGCATGTGGCGCGGATGGCAGCGCTGGCGGCTCAGTGTAACCTGGAGACTCGAGAGGAAATGGAGGCCGAGCACAGGAGGGTGACTGCAGAGAAGGCGCAAGCGGAGCACCTGTTTCAACACATGGATCAACAGGCAGTATTGGAATGTAGTGTCCTGCTGGACAAACTCCACAAACTAGACCATAGCCATCTGCAGCGCTGTCTCCTGGTCAGACACGAGGAGGCCTCTGCAAAGGTCCAGCGTCAGATCGTGGTTTGCCGGAGAGTGGAGCtccataaaatattttttgaagagCTGGAAGAAGCAACAAGGATGGGGGAACTCGAAAAGAATGTGGCCAACGGATTATTGCACGCCTATTTCGTGAGCCAGGATCAGCTTGAGGAGGTTTTGGACGTCTTCCTGGCCAACCAGAGGAACGTTCTCGGGGAGAGACATGCTCAGAGGCAGTTTCTAGTGCATAGCCTTCAGAGCTTGAAAAGTTTGATATGTGACGTCTTCACTAAAACATCTGGTCAGATGGAGGGCTGGTTCCAAGAGCTGAAAAAtgaagGCTATGTAACAGAGGAACAAGTGGACTTACTTTTAGAAAAAGCCAAAAAGGAACTACTTCATGTGAAGCAAAATTTAGATGAGATTTTGAACAGAGAGAAGAATGCCTTACACTGCAGCCTCATCAAGAAGAGGAGAACCCTAATTTCTGACAAGcTTAAAGAGcataaacaaaagcagaagGATCTTTCTGCTACTTCAAAGACTTCAGATGCAAACCTGGATCTAACTCACTACCTGAACTGCTGGCAAAACCTTTTGACCTCCCAGTGTTTAGAACTAGGAGAACTCATTAATAACCTGGATGAGGAAGGAGCTGCTGACATCCGGAAAGTCACCATGCGCCTCATCCAAAGTGCCATGAGTGACATCAAGGCCATCCAGTCCAATATGGCCCAAACGTTGACTGGTTTGGGAGCTCCGAGGTACGCGCTGCAGCACGCTGGACTGACACACGAACTGGTGTCCAGTGCTCTCACTGAAGTCCAGGAGAGGCTCCACATAGAAGGGAAAATGGCAGTGAAAACCCTCCAGAGGACCAGGGATTCACTCCAGGAGCAGCTGGGGTTGGAGGTCCAGGAACAGCAGGTCTTGAGGCACAGAGGAAGAACAGTGTTTCAAAATCTGTGTGCAGCTCAGCTTGCCTTGTCTGATGACgagttattaaaaatgaagctggAGTTTCAAAACTGTCTTTCAAGGATGGACAATTGCTTGGTTCTGCCGAGGGCTCTGGCAAGATCCCGGCTGCAGGCCTACTTGTCAGAGTGGAGGAAAGCAATGCTAATGAAGATGGAACATAGCTATATTACCCAGCAGGACAAACCGGTCCTGGTGGAGATGCGCTACGAAAGAGAGGATCTTCTGAAAGCCCAGGAGGACCGACTGGCAGTGCACATAGCCTCTTTACAGTTTCAAAAAGCTGAAAGGAGAGCGAAGACCCTGGAGGCATATTCTGCCATTCTCAATCTGCAGACAGTGCTGGTGGAGGAACTACGAATATCAGGAGCAATGGCAAGCCCTGAAATAGCACAGGCAATCCAGAACCACAGCCATGGATTAGAAGATGCGGAGAGTGTGCTCCACAAGGAGCTGGCTGAATGGGATGCTTTAATAATGGAGCACAGCTTGACCTCAGAAACTGTTGCACCTTCAGCTGAAATCTATAAAATAGAGGAGGACTGTCGCATAGCTGTCAGTTTACAGCAATCTCTCAACAAGTGTCAGCAAGTGATAGGGGCTCAAAGAAAAAGactgAGTGACGACGACACGAGATGTCAGATAATGGAAGATTTGAAAGAGAAACTAGAGTTTAAGAGAATCCATATACATTTTGATCAGGATCTTGAGTTTGCTGCTAATTTGATAAAACAGTGCCAGATTTCAGCCAACATTTTACTTGAAGTGTTGCACTTGTTGCTCCCCACATCTTCAGAATCTGACTTGATTTCCTTAGTTGATGCTCTGTGCCCTAAGACATCTCTTCCACTGACTGGAAATGAGAAAGTCAATGGgtggGCTGAAGGATCGAGAAAATCACTTCTTTCCAAACTAAGAGAAGACATCATCTATAGACATTTGGCACCTGCTCCACTGGTAACTGGGGAGGAGAGAAGTCTTGTCcaggaaaatgcagaaaatcagTGCCCGTCTCCAGCTGCAGAAATCTTGGACCTTCCTGACACAGGAgagaaagtgtttgtttttcgcagtgaaacagaacagaaagacTCTTCAGACAcagtttgtaaaatgaaaaagaaaaagaggaactTCCTGAACTTCAAAAAGGCAGCGCTTGTCAGCACAGCCAAGATATCaacatgtgttttttcatttcagttttgtgtgttAAATAGCCTTCCACGTATTTTCCTGTATTTCCCAGaAATGGAAGGGATTGTTGCGATCGTTTCTGATATCTCAGTGGGAAAAGATCCGTCCAACGTGTTCCTGACCTTTCTCAGCAGTGACACCATGCCCTTAGACCAGGTAGAGGAGAAGTGCACGCGCTCAGCTCTGAACATGTTGATGATGTCCTCGACCGCG

Function

GO: NA

KEGG:

id description
K19608 EVC2; ellis van creveld syndrome protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017598 True 3183 mRNA 0.47 19 12961986 13061226

Neighbor

gene id symbol gene type direction distance location
AMCG00017594 NA coding downstream 69426 12890192 ~ 12892560 (-)
AMCG00017590 NA coding downstream 222887 12730031 ~ 12739099 (-)
AMCG00017588 NA coding downstream 251822 12704458 ~ 12710164 (-)
AMCG00017591 NA coding downstream 273471 12682426 ~ 12688515 (-)
AMCG00017589 otop1,LOC106583410 coding downstream 284303 12671108 ~ 12677683 (-)
AMCG00017602 LOC107742497 coding upstream 18905 13080131 ~ 13105870 (-)
AMCG00017605 NA coding upstream 45779 13107005 ~ 13142072 (-)
AMCG00017604 NA coding upstream 82905 13144131 ~ 13179970 (-)
AMCG00017606 NA coding upstream 155073 13216299 ~ 13226003 (-)
AMCG00017607 NA coding upstream 175909 13237135 ~ 13242580 (-)
G91576 NA non-coding downstream 305653 12656069 ~ 12656333 (-)
G91562 wdr1,LOC106565198 non-coding downstream 440772 12517080 ~ 12521214 (-)
G91556 wdr1,LOC107717326,LOC106583413 non-coding downstream 452843 12506627 ~ 12509143 (-)
G91553 NA non-coding downstream 462039 12496291 ~ 12499947 (-)
G91539 NA non-coding downstream 620251 12341442 ~ 12341735 (-)
G91850 NA non-coding upstream 982895 14044121 ~ 14044527 (-)
G92006 NA non-coding upstream 1738864 14800090 ~ 14800401 (-)
G92024 NA non-coding upstream 1863167 14924393 ~ 14925960 (-)
G92049 NA non-coding upstream 1993237 15054463 ~ 15054684 (-)
G92050 NA non-coding upstream 1994066 15055292 ~ 15056623 (-)
AMCG00017582 NA other downstream 639616 12307781 ~ 12322370 (-)
AMCG00017569 NA other downstream 1061386 11877360 ~ 11900600 (-)
AMCG00017563 NA other downstream 1455166 11504024 ~ 11506820 (-)
AMCG00017556 NA other downstream 2464882 10361300 ~ 10497104 (-)
G91119 NA other downstream 4206079 8755288 ~ 8755907 (-)
AMCG00017631 NA other upstream 1371932 14433158 ~ 14484818 (-)
AMCG00017638 scoc,LOC103463814,LOC103132857 other upstream 1698842 14760068 ~ 14764832 (-)
G92124 LOC101154678 other upstream 2805721 15866947 ~ 15867647 (-)
G92129 NA other upstream 2969176 16030402 ~ 16030905 (-)
AMCG00017663 NA other upstream 4326258 17387484 ~ 17395049 (-)

Expression


Co-expression Network