AMCG00017605


Basic Information

Item Value
gene id AMCG00017605
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 13107005 ~ 13142072 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017605
ATGGGAGAACTGCAGCAGAAAACCTTTGAGGAAGAGCATGGCAAGCATATAAAGATAGTGgtcaatgaaattaaatgcagagATGCCATTCGAGTGGAAGTCACAGAGGCAAGTGAAGACCTGATTAAGAAAATTACGGATATGAGTGATTGCAGAGATAAATGTGAAGTTATTATAGATGAACTGACCGAACTATCAGCAGTTGCTTTTAATGAGGTGAAGCTTGACAAACCGTGTATACAACGGGAGAGAGCCATTACTGACCAAGAGATATGGGAGGGagaacaaagagaccaaagatctCAGGTGGAAAACAAACTTCATGGTGAGAGTGAAAGAcgacatacagacacatttcAAGATGAATCTGTGCTTCATGACAAAGACAGTCAATGTGAAATCCATactttttttgttcatgttcCTATTGAGAAAGAGGTTTTCCGAGAAGAAATTGACATAACCGCAGCAGCTGAAATTGACAAGGTTGGTGCTATAATCAGGATGAAAACACGATATTTAGTAGAAATAGAAGAGAGGAACCGAAAAATTGTCGAGCTGACCGGTGCCTTGCAAGATGTTCAGAGGAAAGTTGATCTGCAAATCGAGTGTGAAAGAAAACTTCAGCAAAAGAACAGGATTCTGGAATCCCTCCTGGAAGACATGCAGAGAGGTAGTGCTAAGATTGGACAGGACAAAATTACACGCATGGAGAAGTTACTGAGCATGAGAGAGGAGACGGTACAGGAATTGCAAAGCCGGTTGACTGGCCAGGAACAGCTGCTGAAGGAGATGGAGGAGACGCAGAGGAGACTGTCCTTACGCAACGAAGAGTTGGGCACCAAGCAGCGTGGCCTGAGCGATGAGGTCCACAGGTGGAAGGTGAAATGCTCCAACTATGAACAACATGAGAAGGACAGAAGGGTTGAAATAAAACTACTGAAAGAGAGGATCAATCGGCTGGAGTTTGAAAATTCAAGCTTTGAGTCCAAACTGAGGGACAAAATTGAACAGCTTGAGGCTCTGGGTGCCATGAAGGAGAAAGAAATTGCTAGTCTGTTGTCAGAGCTGAAAAAGTTAACCGTAGACTTTGAAATGAAGGAGGCTGCTTGGCTGAAAGACAGGCAAAACCTTGACATGCAGTTGAGGAAGAAGGTGAGAGAGTTCGAAGCATCTGATGATCATTATAAAAAGCTGAAATGGGATTTTCAGTTGGTGGAGGAAAAAGAGAATAAGCTGAAACAAGTGGAATCCACACTTCAGCAGAGGAATAGAGTGCTAGAAGCTCAGCTCTTAGAGCAGTCTCAGCATGTGACATCTTTAGAGGAAGCAATAACAAGAGAAAGGCAGGCATTGCACACTGACTTGGAGGAGGCAAAGCAAGAGAGGAGTGGCAGTCCACCTGAAGAACCGATGGTCAACCAAGAGTTCCTGCTCCTCTCCCAGAGGGTGAAGGTGCTGGAGAACAGCCTGCGCAACAATGTCAACACATTCTGCGAGTCTGAGGCGGCGCTAAGGAACCGAATTAAAGAACTGGAAATTTCTGAAAAGAATCTCCTGGTCAAGGTGGATGATCTCAGTACCAAGTCAGTGTCCCCCATCGCCCCCCGACAAAGACAAGATGAGAAACTACAGATGCTCAGGGAGGAAATGAGGAGCATGGTATCGGAGAAGGACAAATCAGAGAGAGCTTTGAAGGAGAAAATCCGTCGCTTTCAGAGCCAGATCAAAATGAAGGAAGAAGAGATGAAGAAGCAGTCCGAGTACTTTGAGCACTACAAGCAGAAGGTGCAACAGAAACTAGCCCTGATGAAGGAGCGGGAGCACAGCCTTCAGGGCCAGATCTtcaagatggagagagaggtgaTTGACCTGACGGCCACGGCGGCGCTTCTCAGAACCGAGCTGGAGAGGCAAGACCCCGAAACCGGCGCCTCCGGAAGAGGCCAGGGCCCGGCAGAGTTTGATGCAGAGATCAGGATGACTTATTTCTTTGAAGACAGTGAAAGCCGCATAAAGGGATACATCCACAGCCTGCAGGAGGATTTGAAGAACttgctggagagagaggaagccAGCCACATGGAGAGGAGGGAGCTGAAGGACCGACTACAGGAAGCCGAGGATAATGAGGAGTTTCTCAGCAGGAAGCTGGAGGACTTCCGCTCCCGAATTCATGAACTGAAACTCTCGGAAAGCGGCCTCCTGGAGGAAGTGGAGGAGCTGGCAGAGGAGAATGAGCGCCTCCGCAGAATGATCCCTGAGGTGAGGGAAGAGAGTGATTCCATGGCAGGAGGAAACCCAACCAAGACTGAGTCTGGAAGCCAACAACGTACTGCTCTTGATAGCGATGCTGTGGACTCTTTGAAGTCTAATCAGCTGAATAGGCTGTATAACACCATCACAGAATTCATGgAAGAACAGGACTTAGAGAGCCGACACACACATTTGAAGAGTTCGCTGAAATATCTGAAATCTCAGCTTGAGACTGGTGGTGTTGTGTTCAGAGAGGAGCTGCAGCAGTTGAAATGGGATGCCATTCTGGATCAGTCCAGGAATAAAGCAGTTCAGACCCCTTCAGTGACCGAGTGCATCAAAGAGGCTCTCGCCATTGCCAAATTGATTCCTCAGTCCGGGTGTTCACGTCAGTGTTCGTGTGAAGACCTATTGAGACGGTCTGTATTTCCTTTGCTGGAAAACAACTCCAGGCCCCTTCCAGAGATCATGCAGGCTCTTCGGTGTGGCGATGTAGAGCAGGTCAAGTCAAGCCTCAAAGAACTGGAGACCCAATCAAAGCTAGCCCTGCTGCTTGGTTCATTTGCAGAGCATGAAAGTACAGCTCTTTCTAGACTATGGATTCATAACCATAGCCAAGGGGCAGAAGAGACTAGACATGAAGATGAAAGGTCTCTGTCCAAACATAAGGAGACTATAATTAAGAAAGATGAGATGGAGAGCTCTTTGATCAGTAGAGATGATGCAATACACAAACTGACTGAGATGAATGTCCAACTGCAACAGAAATTAAGTGCGATGGAGAGGCACATGCTGGAGTTTTCTGAGGAAGGAGAAACGGAGAAAAGCGAAAGTGACTTGGAGctggaaacattaaaaaataattggagacaagaaaacaaagtcCTTGGAAAATGCAATGAAGAACTTCTTAATCAGATTTCACATGTCGAAGGGGTTCATGAGTGTCAAATGGCAAAATTGAATGAAGAAATTGTAAAGCATCAGGAGAATATTTCCAAGCTTAAGGAAGGCAATAGCAAATCATCCTGCATAATATCTGAGCTCCAGAAAAAGATGGAAAATGATTCAAATGTGATTCTTGACCTCCAGGAGAACCTCAGAAAGAGTTCTAGGGAGGTCCTAGGCCTCCAGGAAGAGAAAATTGAACTCCGACAGCGTATTTCAATACTGGAACACAAGAGTAAGCTGAACTCTCGTACTGTTTTGGAACTTCAAGCAAAGATTGAAGAGATTTCTGTCCTGAATGTTCAACTAAACAAGAATCTAGAAGAAAGCTCTGAGATTCTCAGGCAGTtacaagaagagaaaaaacagcaacagataTGTATTGCAAAACTAGAAGAAGATAATACCTTGTACTCTAAGACTGTTGAAGAGTTGCAAATAGAAGTAGAACATTTGCTTAACTTAACTGTAAAGCTTAAATATAAAGTGAAAGATGTTTCTGCAGGAAACAAAATCAAGGATTGCTTAGTCCAGCTGGAAActttaactgaaaaaaacagcaatccTGTTTACAATATACATGAGCAACAAGAAGATATCAACAACAGTTCCAAGATAATCCAAGAAGGGAAAGACAACAGTGTCCAGGAGATAGCTCAAATGCAGGAAGCCTGTAAGCCTACTGAGAAGTTTGGGACACACCAAGATAAACCTGAGACCATCTCTAAAAAACTGTCAGATCTGCAGGGTGCAATTGAGCAGCTTGCTGATGAAGTGGTGCATCTTCATGGagagaacaaaataattgaaagagaaCTGGCTGATATGCAGAGCGAGCATGCCAAAATcctgaaagaaagagagagtgcaATTAATACAATCAGGGCCCAAAATAAAGAGCTGTTGGAAAAGGTTGTGAACTTCGAAAATCGTGAGAAGCAATCGATTGCGAGAGAATCTGACCTGAGGGGAGAAATTGACttactaaggaaagaaaatgggaaGCTCCTGAATCGTATCGAAGACCTGAAACTCAATCAAGATGCTGAAGAGAAGAAACATGTAGGAAAACCTCAAAAGGAAAACGAgGCACAGAAGTGGTACCGAGACATGGGTCTAGCTGAGACtaaacgagaggaagccatgAAAAAACTGAGCCAAGCTGTGAATGAGGTGAAAAGAATGAGAGAATCTGTGAAAGAGGCAGAAAGGGTGAAGACCGAGAATGCACGACTACGAAATGAGATAAATGAACTGGAAAAAGGAACAGCTGAACTAGACCGTGTGTGCGGGGGAGTCTTGGAATTGAAGTCCCAGCTCAAAGAACAAACTGATTTGGAGGAAAGCCTACAGGAACAGCTCAGTGCAAAGACCGCGTGTGAGAAAGAGCTGAGAGCACAGAACGTCGCCCTGAAGAACGAGCTCAGTAAAGTAGAGGACTGGAGCGCAGTCGTGCAGGGACTCAAGTCTCAGTATGATGACATCAGACAGCAGGCCaagctggcctgtgtggtccagAAATGCCATGAGCGCCACAGCCTCATCCTTCAGTTGGTGAGGGTGCTGCGCAGGCATGGCTTCATTGACTTCAGGCTGATTGAGGAGGCTGAAGACCTGGTGAATGACACCGCGCTGATGGAGTACTCTAGCACTTTCACTCCTTCACATGGCAACCAATGTAGCAGGAACTGTATTGGTAACAAGCAGCTGTTGATTCTTGCCTGTGATCCAGGGCCGCTGCAGAGCTCTCTATCCAGTGGCAGAGGGAGCCTCCCAGACCTCGATGGGTGTCTCAGCTTCAGGTCCTGTGTAGCTAGAATGGACTTCTCTCCTTCCCCTGACATGCCAAGGACAGTGCTGCCCACTCTACCACTCTCTGCGGGGGAAGCAGTACAGGTCACTGGAGTTCCTGACAGTCATGGGTTGTACCATGCAGAGGTGAAAGGAGAAGTTGGGCTGGTTCCTGCTTGTTTCCTAATAGAAACGGAGGACCTACAGCCAGCGTCCCCCATTCACAATAAGTGTTCCAGTCCAAGACCAAGGTTAACCAGTCCTGAGAGGATCATCAATCTCCATCATCAACTGAAATCACATTGCAGCAATTACCAGGTAGTCTCGTCGGCCACGTCCGATTCCAGCCCCGAGACGGACCACAGTTCGGTCTCGACTCCCTGTCTGGTCCAGGAGGGCACATCCGGCCTCTCACTGTCACAGCAGCAGGAAGAGGTGGCAGATCTGAAGTGCCCCACTCTCTCCAAGTCTCTGGGAGGGGAGGGGCAGGGTCGTCTCAGTGAGCTGAGCAGGAGAAATGTCAGCCGAGACGCTGGAGTCATACTCAATAACGCATGGCTCTCCAGGGATGATGCAAATTGCTCTGCCGCAGCAGCTGCAATGAGGAGCAATTTGTCAGACTTGTCACTTCTGAGGAGCCAGGGGCAGGATGGCAAGGGAATAGTCTCCAATGCCCTGTTTCCAGAAGGCAGATCAATAAGAGCAAAACAAGAACCCCCTTTGCCCGTTGGCTCCGTGGAGATTGTAAAGACTGTGGGCCACAGCAGCCTCATGATTGGCTGGGAAAGACCTCCTCTCGATGAGCTCGGCTGCAGTAACGGCATCTTTGTTTATGGTTACAGGGCTGTGCTGGAAAATGTCGACCTGTCAGTTTCGTTTCAAATCAGTGTCCAGACTCTAGGAGCCAACGGGCTGTTCTCTGAGAAAGTTCATGCTCACTTCCAGAGCCCCATCTCTCCTGCTGGGCCGGAGCTGTCCTCTCCAGACCTCTGGACTCCTCACTCTTATCAGCACAGCGGGCAGCCTtttgttgccATCTACAACTATAGTCCCTTGAAGGACAGCCCCAATATTCACCCAAGTCGAGAGCTGGCGTTCAAAGAAGGGGACCCAGTGTGGGTGTTTGGAAAACCCAGGAGGGATGGCTTCTGTGAGGCTGAAGCTAATGGAAGGCAAGGTCTCGCACCACTTGCATTCCTGGAGGAGGCTAATGTTAGACTGCCGAGTAAGACAAAGGAAAATGCGCCAAGGATGCTGGCTCTCCCTCCAGGGCTCATTGAAACCAGCTGCGTTTCTCCCTCTTCTCAAGTGCCATCAGCTGCCGCCTGTGAAcacacatcaaaccagagaaaGGTCCTGGACTTTACACTGATgaaatgcattcacacagaaaggaaaaaacaaaacacaaatgccttATTTTACAGCTGGAAGCACACAGCATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017605 True 6441 mRNA 0.47 23 13107005 13142072

Neighbor

gene id symbol gene type direction distance location
AMCG00017602 LOC107742497 coding downstream 1135 13080131 ~ 13105870 (-)
AMCG00017598 NA coding downstream 45779 12961986 ~ 13061226 (-)
AMCG00017594 NA coding downstream 214445 12890192 ~ 12892560 (-)
AMCG00017590 NA coding downstream 367906 12730031 ~ 12739099 (-)
AMCG00017588 NA coding downstream 396841 12704458 ~ 12710164 (-)
AMCG00017604 NA coding upstream 2059 13144131 ~ 13179970 (-)
AMCG00017606 NA coding upstream 74227 13216299 ~ 13226003 (-)
AMCG00017607 NA coding upstream 95063 13237135 ~ 13242580 (-)
AMCG00017601 ppp2r2c,LOC106604865,LOC106611902 coding upstream 122159 13264231 ~ 13273833 (-)
AMCG00017603 ppp2r2c,LOC106516650 coding upstream 143701 13285773 ~ 13304335 (-)
G91576 NA non-coding downstream 450672 12656069 ~ 12656333 (-)
G91562 wdr1,LOC106565198 non-coding downstream 585791 12517080 ~ 12521214 (-)
G91556 wdr1,LOC107717326,LOC106583413 non-coding downstream 597862 12506627 ~ 12509143 (-)
G91553 NA non-coding downstream 607058 12496291 ~ 12499947 (-)
G91539 NA non-coding downstream 765270 12341442 ~ 12341735 (-)
G91850 NA non-coding upstream 902049 14044121 ~ 14044527 (-)
G92006 NA non-coding upstream 1658018 14800090 ~ 14800401 (-)
G92024 NA non-coding upstream 1782321 14924393 ~ 14925960 (-)
G92049 NA non-coding upstream 1912391 15054463 ~ 15054684 (-)
G92050 NA non-coding upstream 1913220 15055292 ~ 15056623 (-)
AMCG00017582 NA other downstream 784635 12307781 ~ 12322370 (-)
AMCG00017569 NA other downstream 1206405 11877360 ~ 11900600 (-)
AMCG00017563 NA other downstream 1600185 11504024 ~ 11506820 (-)
AMCG00017556 NA other downstream 2609901 10361300 ~ 10497104 (-)
G91119 NA other downstream 4351098 8755288 ~ 8755907 (-)
AMCG00017631 NA other upstream 1291086 14433158 ~ 14484818 (-)
AMCG00017638 scoc,LOC103463814,LOC103132857 other upstream 1617996 14760068 ~ 14764832 (-)
G92124 LOC101154678 other upstream 2724875 15866947 ~ 15867647 (-)
G92129 NA other upstream 2888330 16030402 ~ 16030905 (-)
AMCG00017663 NA other upstream 4245412 17387484 ~ 17395049 (-)

Expression


Co-expression Network