AMCG00017607


Basic Information

Item Value
gene id AMCG00017607
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 13237135 ~ 13242580 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017607
ATGACTGTGGTCTCCCCGGCTGGGGTCACCTCAATACCGGGGTACGATCTTACTACCGTCCAGCACCTTCAGTCGGAGGAGACGGGGGCGCTCAGTGAGAATGCAGCCGGGGAGGAAGGAGCGATCGTCGGACTGAGTGGCAGCAGCAACGCCGGGGATGGGAGCCCTGACCCGGCTGCCTTCATAGACGGCGTTCCCGTCACGGTGTCTGTCCAGCACGTTGACGGACAGCAGAGACAAGACAGCTATTTTTTCACTACAATAGAAGAATCAGAGGAGGATAAGCTTGAGACTGTTGAAGAGGGGACAGAACCCATCACCGAATCAGATAACACAGATGAGTTGCCCAAAATGGAAACCCCAGAACAGACCACAGCAGAGGAGGAAACGGATTACAGTGACTTTACTCAAGACTTTACTGTGACAGACCCAGTACCTGGGCCAAGAGAGAACCATGTAGAGGAAGCACAGACTATGATGGTGGAAGCCAAGGAGGAAGGTCCGTGTGTAAACTATGAAGAATACATGGAACGATACAGAGAACttcagaaagaaaagcagaagatCATCCAGCAGGATTACCTAATTCATAAGCTAGAGCAGTACCTCCACAGAAAGACAGGTGAGGAGGTCCGCCACGAGAGGGAGAAGCCATTCTCAGATCAAGAGCAGCGCTACATCAAGTATATGGCTAAAACTCCAAAACTGGTGCTGCAGCACAAATCAGAATCGAAAAGCTTCCAGCATCAGCTTGAGAAGCTGAGAGCCCAGTCCCAGAAGAAGGTGGCCCAGGTAGACCGCAAATGGAAGGGCTTCATGGATTTCCAGAATGAAGCAGCAGTGTCTTGCCTAAGCCGACAGCTGAGAAAACAGGCTGCTATGAGGCAGGTGGAGCAGGACCAGGCAAACGAGAATTATTTGGAGAAGGAGCTGATGCATTTGCACCCGGAGTTCATCAAATTGATTAAAAAGACCAGGAAAATTGAGGAGAAGCTGGTTAGGGGGCTGGACCCCGAGGACATCAACCGGCTAGAGATAGAGAACCAGCCATACTATGAGAAGATTGAGGAACGCAACGAGGAGCTGCTAAAGGTCCACAGAAAGATCTCCAGCACAGTGCAGGTCATTACCCCTACTAAAGAGAAGCTCCAGTTCGTTCAGGTAGAGAACCAGGCCAAGAAGGCCCAGCTTACTGAGGTGGAGGCTCCTGTAGCATTCAAGCAGGACATCCTCACAAGGACCAAGCAGGCCAGCAACAACCTGCACATTGATAACCTAaagctggagcagcagtgtggccTCCGGGGCAATGAGACCTTGCTCCGGGACTTTGAGGAAAAGGTAGATGTTTCTGAGGCCCTCAGTCAGAGGCTAGAGATGCTGAAACGGCGTCATGCTGAAGATGTGCAGGTGTCAAGAAGAAACTTGAGCAGGCTAAACCTTCAGGCCGTCATGCTAACCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017607 True 1464 mRNA 0.51 2 13237135 13242580

Neighbor

gene id symbol gene type direction distance location
AMCG00017606 NA coding downstream 11132 13216299 ~ 13226003 (-)
AMCG00017604 NA coding downstream 57165 13144131 ~ 13179970 (-)
AMCG00017605 NA coding downstream 95063 13107005 ~ 13142072 (-)
AMCG00017602 LOC107742497 coding downstream 131265 13080131 ~ 13105870 (-)
AMCG00017598 NA coding downstream 175909 12961986 ~ 13061226 (-)
AMCG00017601 ppp2r2c,LOC106604865,LOC106611902 coding upstream 21651 13264231 ~ 13273833 (-)
AMCG00017603 ppp2r2c,LOC106516650 coding upstream 43193 13285773 ~ 13304335 (-)
AMCG00017614 NA coding upstream 298005 13540585 ~ 13542138 (-)
AMCG00017616 grpel1 coding upstream 306845 13549425 ~ 13553804 (-)
AMCG00017617 LOC107738968,LOC107733469,LOC107584377,LOC107657296,LOC107665873 coding upstream 588766 13831346 ~ 13867377 (-)
G91576 NA non-coding downstream 580802 12656069 ~ 12656333 (-)
G91562 wdr1,LOC106565198 non-coding downstream 715921 12517080 ~ 12521214 (-)
G91556 wdr1,LOC107717326,LOC106583413 non-coding downstream 727992 12506627 ~ 12509143 (-)
G91553 NA non-coding downstream 737188 12496291 ~ 12499947 (-)
G91539 NA non-coding downstream 895400 12341442 ~ 12341735 (-)
G91850 NA non-coding upstream 801541 14044121 ~ 14044527 (-)
G92006 NA non-coding upstream 1557510 14800090 ~ 14800401 (-)
G92024 NA non-coding upstream 1681813 14924393 ~ 14925960 (-)
G92049 NA non-coding upstream 1811883 15054463 ~ 15054684 (-)
G92050 NA non-coding upstream 1812712 15055292 ~ 15056623 (-)
AMCG00017582 NA other downstream 914765 12307781 ~ 12322370 (-)
AMCG00017569 NA other downstream 1336535 11877360 ~ 11900600 (-)
AMCG00017563 NA other downstream 1730315 11504024 ~ 11506820 (-)
AMCG00017556 NA other downstream 2740031 10361300 ~ 10497104 (-)
G91119 NA other downstream 4481228 8755288 ~ 8755907 (-)
AMCG00017631 NA other upstream 1190578 14433158 ~ 14484818 (-)
AMCG00017638 scoc,LOC103463814,LOC103132857 other upstream 1517488 14760068 ~ 14764832 (-)
G92124 LOC101154678 other upstream 2624367 15866947 ~ 15867647 (-)
G92129 NA other upstream 2787822 16030402 ~ 16030905 (-)
AMCG00017663 NA other upstream 4144904 17387484 ~ 17395049 (-)

Expression


Co-expression Network