AMCG00017622


Basic Information

Item Value
gene id AMCG00017622
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 14009914 ~ 14017592 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017622
TAGGGGAGTGGAAGAATTGAATATGAAGATTgaactaattatatatttcctaATTTTCTACTTGACTTTAATcgTTGCCTATGGAGAAACCCTGCAGCACCTTATGGCCGATAAAGAAACAATAGTGAAAATATCAGCTTCTGGAAACTTAATCCAGTGTTCGGCAGCTGTGGACATCCTTCTACTCATGGATGGCTCATATAGTATTGGAAAGGGGAGCTTTGAAAGGTCAAAACATTTTGCCATGAAAATGGTTGATGCATTGGACATTAATCCTGACCGGGTTCGGATTGGAGTTATACAGTATAGTTCAAAACCCAAGTTGGAATTTGCTCTGAATGTTTACCCTACGAAAGAAGAAGCTAAAGAAGGAATTGGAAGTATTCATTTCAGagGGGGGAGTACAGCAAGTGGCCGAGCCATTAAGCATGTCCTGAGGAAGGGGTATCCGGGGGGGAGAGAGGACACGCCCAAGATCCTCATCCTGCTCACCGATGGAAAATCACAGGACAACGTCATGACTTCAGCCACCTTTGCCAGGAAAAGTGGAGTCAAACTGTTTGCAGTAGGAATCAAATATCCCAAGTGGGAGGTTCTGCACAGCCTGGCCAGTGATCCCAGCGAGatgtatgttttctttgctGAACACTATAATGATGCAGTCAATGGCCTTGTCACAACTTTAACCCAGATATCAGTTTGCAATGATGTCCATCCTACATGTAAAGTGGAGTCGCGTTACTGCCTGAGATCCACTGTAGAGGCTCACAGACAGTTCCAGGGAAATCATGTTTGTTGGAAGAGAAAAAGCAAAGCACAGCATGGAGGACCCATGGCCAGTATATGTCCTCACTATGGATGGAAACGCATCAACACTACAATACAAACTCGATGTCACAGGACAGTGTGTCCAGACCCCTGTGAGTCCGGCCCATGTTTAAATGGAGGCACCTGCATTACAGAGAGCGTGGACGACTTCAGCTGCCTCTGCCCACTAGGATACGGAGGAGACCAGAACTGTGCTGGAAACCGGTACCTTAGGCTAGTGGACTGTGCAGTGGACCTGCTGTTCTTGTTAGATGGATCCTGGAAAATGGGCCTTGAAGGGTTTCTCGTAGCCCGAGATTTTGCTAAGCGATTCGTCCAGACCGTCTTTGCATCTTCAGCCAAAATCCTGGTCGGGGTGGCGCAGTATGGGGACGAGGTGAATATGGAGATCCCCATTGGTGGCTACGGCAGTGTCTCAGAATTGACGAAGGCCATCAACAGCATCCACTTCCAGGGAGGCAATACATTCACAGGGAAAGCGCTGAGCTACATTGCAGAGAAGGGATTCAGAGCTGTGGAGGGTTCGAGAATGGAGGTGCCCCATGTCCTCATAGTCCTCTCTAATGCCAAGTCACATGACGCGGTGACAGCTGCAGCAGAGCATGCCAGGCAGAGGGAGCTCTTCATTCTGACTGTGGGCAGCAGCAGGCTGGTCCCTGAAATGAGCCTCATCACTGGGGATTCCCAACTGGTCTTTACATACGCACAGCCACAAGAGTTATACAAAAAGGTACAAGAAGTGAGAACAACAATGTGTGGATTAAACACCCCAGGTTGCTATTCAAAGACTTTGGATCTGGTATTTGCAATAGATGCATCTAGTAATGTGGGACGACACGACTTTCGTCAGATCAAGATCTTTGTTAAGAATGTTATTTCCCAGTTTGACATTGACGCTGAGCTCACCCAGATTGGAATGGTGATATACAGTGACAAGCCTCGAACCCTGTTCCACCTCGGCCATTTTGACAGCGAtaggaaaatgaagaaaagcatCAGCCTGGCCCCTTACTTAGATGGAAGTGCTCAGACGGGTGTGGCCCTGAAGTATGTTTTGAAAGACACCCTGAGTTTCAAGAAAGGAGCCAGACCAGACGTGCATAAGGTGGTGGTTGTTATTACAGATGGCCAAAGCACAGATGATGTCATTCCCTTTTCTCATCAACTGAGACAAAATGGAGTCACTGTTATCTCAATAGGGCCTGGGGCAGCCCAGTCCCAAAGGCTTCTGACAATAGCAGACAGTCCCAGATTTATGATTCTAGTACCTTCATATGAACACCTGAAGCATTACGCAACAAATCTCGTTCGTAAGATTTGTGAAGACAGCAGGGCTTCTGCCAATGTGTGTCAACCAAACCCCTGCCTGAATGGAGGTGTGTGcctgcagagaaacaaaagcTACAGCTGTGAATGTTACGGCTGGGGAGGAGCGCATTGTGAACTATGACCATCACAGGAAAGTGTTTTCTGGCCGTGACATGCTGAGGAGCTCCTTGGCTGATGCAAACGAAGAAGTGAAACTTGAAGAATTAACAACCACTACCTCCCAACTACTCCCTATCC

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05322 Systemic lupus erythematosus
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017622 True 2394 mRNA 0.47 15 14009914 14017592

Neighbor

gene id symbol gene type direction distance location
AMCG00017624 NA coding downstream 38944 13911085 ~ 13970970 (-)
AMCG00017617 LOC107738968,LOC107733469,LOC107584377,LOC107657296,LOC107665873 coding downstream 142537 13831346 ~ 13867377 (-)
AMCG00017616 grpel1 coding downstream 456110 13549425 ~ 13553804 (-)
AMCG00017614 NA coding downstream 467776 13540585 ~ 13542138 (-)
AMCG00017603 ppp2r2c,LOC106516650 coding downstream 705579 13285773 ~ 13304335 (-)
AMCG00017623 NA coding upstream 28288 14045880 ~ 14067539 (-)
AMCG00017625 NA coding upstream 117319 14134911 ~ 14186450 (-)
AMCG00017627 NA coding upstream 253944 14271536 ~ 14278165 (-)
AMCG00017629 NA coding upstream 474937 14492529 ~ 14505953 (-)
AMCG00017630 NA coding upstream 489981 14507573 ~ 14523275 (-)
G91576 NA non-coding downstream 1353581 12656069 ~ 12656333 (-)
G91562 wdr1,LOC106565198 non-coding downstream 1488700 12517080 ~ 12521214 (-)
G91556 wdr1,LOC107717326,LOC106583413 non-coding downstream 1500771 12506627 ~ 12509143 (-)
G91553 NA non-coding downstream 1509967 12496291 ~ 12499947 (-)
G91539 NA non-coding downstream 1668179 12341442 ~ 12341735 (-)
G91850 NA non-coding upstream 26529 14044121 ~ 14044527 (-)
G92006 NA non-coding upstream 782498 14800090 ~ 14800401 (-)
G92024 NA non-coding upstream 906801 14924393 ~ 14925960 (-)
G92049 NA non-coding upstream 1036871 15054463 ~ 15054684 (-)
G92050 NA non-coding upstream 1037700 15055292 ~ 15056623 (-)
AMCG00017582 NA other downstream 1687544 12307781 ~ 12322370 (-)
AMCG00017569 NA other downstream 2109314 11877360 ~ 11900600 (-)
AMCG00017563 NA other downstream 2503094 11504024 ~ 11506820 (-)
AMCG00017556 NA other downstream 3512810 10361300 ~ 10497104 (-)
G91119 NA other downstream 5254007 8755288 ~ 8755907 (-)
AMCG00017631 NA other upstream 415566 14433158 ~ 14484818 (-)
AMCG00017638 scoc,LOC103463814,LOC103132857 other upstream 742476 14760068 ~ 14764832 (-)
G92124 LOC101154678 other upstream 1849355 15866947 ~ 15867647 (-)
G92129 NA other upstream 2012810 16030402 ~ 16030905 (-)
AMCG00017663 NA other upstream 3369892 17387484 ~ 17395049 (-)

Expression


Co-expression Network