AMCG00017628


Basic Information

Item Value
gene id AMCG00017628
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 14467590 ~ 14473360 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017628
ATGGTGGTGCTGATCTCGTATTTGGGGCTTGGAGTTGCAGGAAGTAAATATTCTCGAGATGTGAATGAGCCCAAACCAACCGAGGGTAAAAATATCGGTGAGTTCAGGATTGCCAGACTAAACCAGGTCTGGGAGAAAGCACTTCGGATGCAGCTCCCTCCGGTGAAGCAGGCCGAGCTGCACAGCGACCTGAAGATCCAGGAGAAGGACGAGCTGCAGTGGAAGAAGTGGAAGGCCGAGGGTCTGGACGACACCggagacaaagaaacaaaactgaggcGCAACTTCAACGTAATTCTTACTAAGTATGGGCTGGATGGGAAAAAGGATTTGAAGCCCTTGGAAACCAATTACCTTCAAAACCATGAAAGCAACGACGTGGATACATTTGATGACCCCAGGTTGGACAAACTCTGGAACAAGGCAAAAAGCTCGGGCAAGTTCACAACTGAGGAGCTTCAAAGTCTGCGCAGGGAGTTTCAGCACCACAGGGACAAGATTCAAGAATACAACCTGGTGATGGATGCTGTTAGCAGGACTGAAGAGATTCACAAGAATGTGGTCAGCCCCTTGGAAGGCGATGCGAAGGAGCACCTTCTCCATGAGAAGCACGCAGATCTGAAAGAGAAGATGAGAAACCTCAACCAAGGCTTTGACCGTCTGCGCAAAATAAGCCACCAAGGTTTTGGAGAAGATGGCGATTTTAAAGAACCAAGAGTCATTGAGCTGTGGGATATGGCCCAGAGGGCTAACCTCACTGATGGagaacttgactcccttaaaGAGGAGCTGAAGCACTTTGAGATCAAGGTTGAGAAGCACCAGCACTACCAAGAACAGCTGGATCTGTCGCACCAAAAGCTGAAGCACGTCGAAGCCCTGGGAGATGAGGAGCACATAAAGAGAAATAAGGAGAAATATGACTCCTTAGCTTCGAAAACAAGAGAAATGAGCTATAAGATGAAGAAACACATGCAGGACTTGACCAGCAAAATTACTCGGAATGGACTACACCATAATGAGCTCTGA

Function

GO: NA

KEGG:

id description
K22290 LRPAP1; alpha-2-macroglobulin receptor-associated protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017628 True 1029 mRNA 0.48 8 14467590 14473360

Neighbor

gene id symbol gene type direction distance location
AMCG00017621 NA coding upstream 315811 14135600 ~ 14151779 (+)
AMCG00017626 gpr78,LOC106608662,LOC105020663 coding upstream 335127 14129633 ~ 14132463 (+)
AMCG00017618 NA coding upstream 383154 14068774 ~ 14084436 (+)
AMCG00017619 NA coding upstream 458334 13993591 ~ 14009256 (+)
AMCG00017612 tada2b,LOC107656199,LOC107739399,LOC107653294,LOC107722428 coding upstream 919027 13542461 ~ 13548563 (+)
AMCG00017637 NA coding downstream 252616 14725976 ~ 14746229 (+)
AMCG00017636 NA coding downstream 275321 14748681 ~ 14764827 (+)
AMCG00017640 maml3,LOC107712021,LOC107671314 coding downstream 351174 14824534 ~ 14825214 (+)
AMCG00017641 NA coding downstream 448902 14922262 ~ 14931595 (+)
AMCG00017649 NA coding downstream 507204 14980564 ~ 14996066 (+)
G91849 NA non-coding upstream 423062 14044084 ~ 14044528 (+)
G91740 NA non-coding upstream 553833 13858217 ~ 13913757 (+)
G91727 NA non-coding upstream 934380 13528781 ~ 13533210 (+)
G91726 NA non-coding upstream 941441 13522641 ~ 13526149 (+)
G91683 NA non-coding upstream 1326712 13140662 ~ 13140878 (+)
G91931 NA non-coding downstream 44872 14518232 ~ 14539104 (+)
G92005 NA non-coding downstream 326731 14800091 ~ 14800376 (+)
G92016 NA non-coding downstream 470023 14943383 ~ 15036381 (+)
G92038 NA non-coding downstream 588937 15062297 ~ 15085398 (+)
G92039 LOC107556532,LOC102237872,LOC107674234,LOC107737080 non-coding downstream 592777 15066137 ~ 15067818 (+)
AMCG00017620 htra3,LOC106577909 other upstream 428527 14025636 ~ 14039063 (+)
AMCG00017615 sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 other upstream 636771 13781266 ~ 13830819 (+)
AMCG00017600 NA other upstream 1207830 13196895 ~ 13259760 (+)
G91452 cc2d2a other upstream 2587091 11879614 ~ 11880499 (+)
G91281 LOC103376870 other upstream 4884310 9519773 ~ 9583280 (+)
G92046 NA other downstream 603965 15077325 ~ 15084278 (+)
AMCG00017651 NA other downstream 614772 15088132 ~ 15090829 (+)
AMCG00017652 NA other downstream 619831 15093191 ~ 15106835 (+)
AMCG00017650 NA other downstream 636062 15109422 ~ 15116031 (+)
G92123 LOC101154678 other downstream 1393671 15867031 ~ 15867634 (+)

Expression


Co-expression Network