AMCG00017629


Basic Information

Item Value
gene id AMCG00017629
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 14492529 ~ 14505953 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017629
ATGACGGATTCGGTGGTCGTGGAGGGACAAGTCAAATTCAGAGATGGCAAAAAGGTTTCAAAATCGTCTTTTCTGCgtctttctgttcattttggCATGAGCTGTGTCACCGTGGGATACCCAGATGTCCTTTTTAACTCGTttcatgtgcttttgtttgCCTTGCAGTGGAAGAGTAGGTGGGTTGCGCTCAGAAAGCCCTCCCCTGTAGCAGATTGTCTATTAATGCTTGTGTACAAAGATAAGTCGGACAAAACGAAAGGTCACAAGGAGAGAAACAGCATTACGCTAGAGGACATCTGTGGGCTCGACCCAGGACTTTCCTATGAAGGGGTCAGTCACACCCTTGCAATCATCTGCTTGACGCAGGCAGTGATGCTGGGCTTCGACAACAAGGAGACCATGTATGCCTGGGATATAAGGATCCGCTACAGCCTCGGGGAAGTGCACAGATTTAATGCCGTAGTGCTACCGGGCACCAAACTGGAGAGCGGGCCTGCTACCCTCCATCTGTGTAATAACCTGCTGGTTATTGTCAGGGACCTTCCACCAGCAATAATTGGACAGTGGAAACTGTCAGACCTCAGGAGATATGGAGCTGTCCCGAATGGCTTTGTCTTCGAAGGAGGCACACGGTGCGGCTACTGGGCTGGTGTTTTCTTTCTGTCCTGCGTCGAAGGGGAGCAGATCAGCTTTCTCTTTGACTGTATCGTCCGCGGCATCTCCCCGACCAGAGGCCCCTTTGGACTGCGGCCAGTCCTCCCAGACCCCAATGCCAATCCAGCCTACATGGAAGACAGGGTTAGCCACGAAGCCCTTGAGTTGGAGAAACGCCTCAGTCTCCTGTCTCACTCCAGTCGGCAGAGCAGTACAGCTTCCACCTCAAGTTACAGCACATCAGGTGCACTGGGCGATGACAGAAGCCTGTCCAGCTCCTCTTCTGACACCAGCCACTCAGACACCAGCATCGGGAGCCGCCTGGCGATCTGGCCAGAGCCGCCCATGAGCAGCGCGCCGCTGGAGCCTCAGGGCCTGCCAGCGACGAAGACTGCACTGCAGGGAGAGGAGAAGCTGTACGCTGAAGTCATGCGAGGAACACGGCCACCTCCAAAGCCTCCTCGGTCCAGGAAGCTGCAGGAAATAGGTCGCCAGAGCTCTTCCGACAGTGGGATTGCCACTGGGAGTCACTCCTCATACTCTGGAAGCTTCTCTTCCTACACGGGCAGCCTGGATATCTGCCACGGGGATGAGTTTGGATCCTTGATTAGCCTACCGTTGAACTTTGCATCCGATCAGAGCTTGTGCACTTGCCAGCGTGGCGAGCCTCAGCGGGGTCTGGGCTCCGAGTATCAGGTTCCCAGCTCGCTCAGGCATCTCTATGACACGCCTCGGAGTGTGTTACAAGCGACTGCAACCAGGGACGCACGGAGCAAGAGCCCGGAGAGCACTCTTCCAAAGGACCAGGCAGCTCTGTCCCTCCCCACAGGTATTACAGACACAAAGGCAGCCACACCTGAGCAAAGCTCGGAAAGGAGGCTTGCAAAACCGTCAAGCCAGGAAAGCTCCAGGGACTCCGATGAGATCTACATGGATCTTATTCCAAGGTGGTGTGCTGCACTCCCGCAGGGACAGATGCTGGAATCCAGGAGCAGTGAGGTGGCGCCATCTGCTGGTGTCTCCACAGACCCCTGTGAGATATGCACCCCACCCCCAGGGATCTCAAGAGCTCTGTTTGCTACATGCCCCATCTGTGGAGGATTAAAGGTAGAGTAA

Function

GO: NA

KEGG:

id description
K24038 DOK7; docking protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017629 True 1773 mRNA 0.55 6 14492529 14505953

Neighbor

gene id symbol gene type direction distance location
AMCG00017627 NA coding downstream 214364 14271536 ~ 14278165 (-)
AMCG00017625 NA coding downstream 306079 14134911 ~ 14186450 (-)
AMCG00017623 NA coding downstream 424990 14045880 ~ 14067539 (-)
AMCG00017622 NA coding downstream 474937 14009914 ~ 14017592 (-)
AMCG00017624 NA coding downstream 521559 13911085 ~ 13970970 (-)
AMCG00017630 NA coding upstream 1620 14507573 ~ 14523275 (-)
AMCG00017633 NA coding upstream 24843 14530796 ~ 14552257 (-)
AMCG00017635 NA coding upstream 93330 14599283 ~ 14600616 (-)
AMCG00017634 NA coding upstream 102957 14608910 ~ 14612595 (-)
AMCG00017632 htt coding upstream 108608 14614561 ~ 14657488 (-)
G91850 NA non-coding downstream 448002 14044121 ~ 14044527 (-)
G91576 NA non-coding downstream 1836196 12656069 ~ 12656333 (-)
G91562 wdr1,LOC106565198 non-coding downstream 1971315 12517080 ~ 12521214 (-)
G91556 wdr1,LOC107717326,LOC106583413 non-coding downstream 1983386 12506627 ~ 12509143 (-)
G91553 NA non-coding downstream 1992582 12496291 ~ 12499947 (-)
G92006 NA non-coding upstream 294137 14800090 ~ 14800401 (-)
G92024 NA non-coding upstream 418440 14924393 ~ 14925960 (-)
G92049 NA non-coding upstream 548510 15054463 ~ 15054684 (-)
G92050 NA non-coding upstream 549339 15055292 ~ 15056623 (-)
G92051 NA non-coding upstream 550990 15056943 ~ 15057146 (-)
AMCG00017631 NA other downstream 7711 14433158 ~ 14484818 (-)
AMCG00017582 NA other downstream 2170159 12307781 ~ 12322370 (-)
AMCG00017569 NA other downstream 2591929 11877360 ~ 11900600 (-)
AMCG00017563 NA other downstream 2985709 11504024 ~ 11506820 (-)
AMCG00017556 NA other downstream 3995425 10361300 ~ 10497104 (-)
AMCG00017638 scoc,LOC103463814,LOC103132857 other upstream 254115 14760068 ~ 14764832 (-)
G92124 LOC101154678 other upstream 1360994 15866947 ~ 15867647 (-)
G92129 NA other upstream 1524449 16030402 ~ 16030905 (-)
AMCG00017663 NA other upstream 2881531 17387484 ~ 17395049 (-)
AMCG00017665 NA other upstream 2962652 17468605 ~ 17487497 (-)

Expression


Co-expression Network