AMCG00017630


Basic Information

Item Value
gene id AMCG00017630
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 14507573 ~ 14523275 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017630
TTTAGGTTACCATTAACCAGCCCCGACAAAGACCTTTCCCAGCTGCCACTACCTGAACTAGCATTATTGTGGAGTTGCGTTGCAGCTGGTTGGATCTGTGGGTTGTTTTCTAAGAACTCTTAGCTTTTACTTAAAAATGCCAAACATATAGACATCTTCTGGGAGAAACTTACCGCATGAGCAAGCAAACCACGCTGGATATTAATAATTCCATTATAcagataaatattttacaaaaatccAAACAACAATATGCTCTTTTTAATAACTCTTCTGGTGCCTTCCTGTGTATTTGGCGTTATGGTGCGCACAGTCCAACCGGGCCACGAAATTGCAATTGCTCTGAATTTGCAAAATCAAAGCTATCATAGAGTGCTGACTGAAGACGGGCATGAATGCAAATTCCCTTTTCGTTATGGTGGGAGTATATATCACCACTGCTTGAATGATAGAAATCAGAAACTATGGTGTTCCATTACACATAACTTTGACCGGGATCAGTCGTGGGGATATTGTGCCACTGAAATTTCAGACACACAAGACTCGTGCAAGGAGAACCCATGCCACAATAATGGCCTTTGTACCAACGTCCCTCATTTGAAATCCTACCACTGCATGTGCCCGCAAGAATATAGTGGGAGACAGTGCACACTGGAAAAGTGTTACGATCCAGAGCACCTCCGCTACTATGGGAATGGAGAAACCTGGGGAAGAGTCCACAATCGTAGCGTGGAGCAGTGTACATGCATGCTCGGTGTAATCCAGTGCCAACGCGTTCGCTACACAGCTTGCACCACGAACCCATGTCAGAACGATGCACCGTGCAGAAAGATCATATCAACAGGGAAGACCGTCTGTGCCTGCAGGCCGAGCTATGCAGGGCCACACTGTAGCATCATCCCAAGAAGAAATCCGTATATTCCAAAAGAACGTGACATGGACTGCTTTAAGGAGAACGGCACAAATTACAGAGGCATGGCCAATACTGGCATCTCTGGCAGCAGATGTCTGCCCTGGAACTCAGAGCTGCTGTACCATGAACTGCATTTAGGGACTGTGGAGGACGCTGCCTCTCTGGGCCTGGGGGAGCACTCTTACTGCAGaAACCCAGATAATGATCAGTTTCCCTGGTGTTACGTGCTGAAGAACACACAAATCTCCTGGGAGTACTGTAACATTCCTCCATGTCAGTCAACTGCTTCGCTGTCATTCACAAGGCTTTTACCCAACACTAACATTGAAATGCTATCAGATGAGAATCACACGTCTCAAGACCCTGTCTGCGGAAAGAGACACAAAAAGAGGGTGTTCAGGGGACGGATCATAAAAGGACAGTCTGCCCTGCCTGGCTCCCACCCCTGGATGGCTGCCATATATATCGGGACATATTTCTGTGCAGGGAGCCTGATAAAGCCGTGCTGGGTCGTCTCTGCTGCCCACTGCTTCGCTCACAGCCCCCTGGTTTCCACAGTTCGGGTTGTCTTGGGTCAGCATTTTTACAATGACACAGGTCAAAATTCCAAGTCCTACAAAATTGAGAAATATATCTTCCCTGAAAAGTTTTCGGTGTTCAATCCAACTTTCAATGACATAGTTCTGGTTAaattaaagaaggaaaacaaacattgtgcTAAACGGACTCAATTTGTGCGTCCTATATGCCTGCCCACAAAGCATCTTTCCTTCCCAGACAATTACTGCTGTCAAATTGCTGGCTGGGGACATATGTATGAGAAGGCCGATGCCTATGCCCCTCATTTACAGGAGGGCTTGGTCAACATAATCCCATTTGACCAGTGCTCGAAGCCTGATGTTTACGGGACAGAGGTCAATGAGAATATGCTGTGTGCCAATAGCAATCAGTGTGTGGATGCGTGTCAGGGTGACTCGGGGGGCCCACTGGCCTGTGAAAAGAATGGCGTCTCTTACCTGTATGGCATTGTTAGCTGGGGAGAAGGATGTGGCAACTCAAAGAAGCCTGGAGTCTACACCAGGGTTTCTCAATATGTGGATTGGATCAACAGGGTCACAACACCGATTGTTAAGACCTGATTTATGAACATTTTTTGAATCATGGTTGTGTAGTAATATGTGTGCATTGCCAATGCTGTGAGTATAGAAGAAATCAATCCCACTGAAAAAGTAAATTAGTGGTACGTATTTAGGTATGTAACTAGAGGAAGTTATGGCTACCTActctgaataaaaacatatatgctttttccccctttgttttacagatgaataaaactgaattgtaGTGCATCAAAATATAGGGATACATTTGATGTATAAAATcttctaaaacaaaactattaataaaatgtgctaAATCAATA

Function

GO:

id name namespace
GO:0008233 peptidase activity molecular_function

KEGG:

id description
K09631 HGFAC; hepatocyte growth factor activator

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017630 True 2339 mRNA 0.45 14 14507573 14523275

Neighbor

gene id symbol gene type direction distance location
AMCG00017629 NA coding downstream 1620 14492529 ~ 14505953 (-)
AMCG00017627 NA coding downstream 229408 14271536 ~ 14278165 (-)
AMCG00017625 NA coding downstream 321123 14134911 ~ 14186450 (-)
AMCG00017623 NA coding downstream 440034 14045880 ~ 14067539 (-)
AMCG00017622 NA coding downstream 489981 14009914 ~ 14017592 (-)
AMCG00017633 NA coding upstream 7521 14530796 ~ 14552257 (-)
AMCG00017635 NA coding upstream 76008 14599283 ~ 14600616 (-)
AMCG00017634 NA coding upstream 85635 14608910 ~ 14612595 (-)
AMCG00017632 htt coding upstream 91286 14614561 ~ 14657488 (-)
AMCG00017639 grk4 coding upstream 141606 14664881 ~ 14676075 (-)
G91850 NA non-coding downstream 463046 14044121 ~ 14044527 (-)
G91576 NA non-coding downstream 1851240 12656069 ~ 12656333 (-)
G91562 wdr1,LOC106565198 non-coding downstream 1986359 12517080 ~ 12521214 (-)
G91556 wdr1,LOC107717326,LOC106583413 non-coding downstream 1998430 12506627 ~ 12509143 (-)
G91553 NA non-coding downstream 2007626 12496291 ~ 12499947 (-)
G92006 NA non-coding upstream 276815 14800090 ~ 14800401 (-)
G92024 NA non-coding upstream 401118 14924393 ~ 14925960 (-)
G92049 NA non-coding upstream 531188 15054463 ~ 15054684 (-)
G92050 NA non-coding upstream 532017 15055292 ~ 15056623 (-)
G92051 NA non-coding upstream 533668 15056943 ~ 15057146 (-)
AMCG00017631 NA other downstream 22755 14433158 ~ 14484818 (-)
AMCG00017582 NA other downstream 2185203 12307781 ~ 12322370 (-)
AMCG00017569 NA other downstream 2606973 11877360 ~ 11900600 (-)
AMCG00017563 NA other downstream 3000753 11504024 ~ 11506820 (-)
AMCG00017556 NA other downstream 4010469 10361300 ~ 10497104 (-)
AMCG00017638 scoc,LOC103463814,LOC103132857 other upstream 236793 14760068 ~ 14764832 (-)
G92124 LOC101154678 other upstream 1343672 15866947 ~ 15867647 (-)
G92129 NA other upstream 1507127 16030402 ~ 16030905 (-)
AMCG00017663 NA other upstream 2864209 17387484 ~ 17395049 (-)
AMCG00017665 NA other upstream 2945330 17468605 ~ 17487497 (-)

Expression


Co-expression Network