AMCG00017631


Basic Information

Item Value
gene id AMCG00017631
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 14433158 ~ 14484818 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017631
ATGAGTCTCATGCCAGTGGCCGAAATGGACTCTGCTGAAATGCCTTCAGGTTTTCAGCCTCAGGAAGTAGAGGACCAAAGTCAGATGGTCAGTAGCTGCAGAGAATCAGAAGAAGACAAGAAGCCAAAGAAAAAGGATGAAAAACGTAAAGGAGATCTAGCCTATGAGATTATGGAAGGACGGGGAGTTGAGAAGTCAGCTGAGTTAGATGAAAGAAGCAGCTATGAATTGATGGCTAGCTGTGGTCAACAGAAGATCTTCTATGACACAGAAGatCCAAGAGGAAGCTATGAGTTAATGGCCTCTGCTGTTGAAATGCCAAAGAGATGTGACGCCACACCTGGGGGCATGTTAGTGTTCCCGGCGGATCTGCCAGTGCCAGACAAGCCTCGTGGTGATGGAGTAACCTATGTTAATATTCCTGTCAGCCCAACGTCTAAGAAGCAGCTTCATTATATGGAATTAGAGCTGCAGGACCCTAGCTCTGGAGTTAGAGGAGGCGGCTCCACCAAGTACGCTCAGATTGATATCACTGCCACAGAGACGGCCCACAAAGTGGGGACCCAGCATGCGCAGTTCAGAGAGGAGCGACTGCAGGAACTTGAACAGAAGAAGAAGGGTGCTTTACAGTGA
>TU114641
GTAATGTTCCTCAGATTCTGTACCCTTTGCTTTGTTGATTAATTGGTGTCCTTAAACAGGGGTGCCAGTGTTTTAGTCTCAATTATTTATGCATTGCTAGGGGGCATGTTAGTGTTCCCGGCGGATCTGCCAGTGCCAGACAAGCCTCGTGGTGATGGAGTAACCTATGTTAATATTCCTGTCAGCCCAACGTCTAAGAAGCAGCTTCATTATATGGAATTAGAGCTGCAGGACCCTAGCTCTGGAGTTAGAGGAGGCGGCTCCACCAAGTACGCTCAGATTGATATCACTGCCACAGAGACGGCCCACAAAGTGGGGACCCAGCATGCGCAGTTCAGAGAGGAGCGACTGCAGGAACTTGAACAGAAGAAGAAGGGTGCTTTACAGTGACCTAATGGTGGAACGTCCATCTCAAGATCCATACATTGTCCGGATTGCCTGCTCTACAGGAATATTGCTTCGGGCAGTTCGATAAAGGCGATGGAAGCGCACTTGGTTCCAGAGTACGGTGCATCGTGTCAATGCAAGGGTTATTGATGCATGGTTCTAGCAGGCAGTTTGGCTCTTCCATTTGACACAACAGGCAATTTTATGTACCTTCAACAGACGTTCCTGCCAAGTTGTGTGTGAGTTGTTCAAatagaatgtattaaaaaccaGATACATTTTCAGGCTTGACATTCACAGAAATGTTGTCAATATTCACTTCTCTCCTCATGATTTTCTATATTTCCACAGACCGGCTCCACCTTGGAAATTATCCCCATCTCTGTTGCGATCCAGCTAGTGCTACTTACCTGTAAATTGTCTGAATTCACCATGTGTTCAAGTGGTATTGCAATCTGTGGCCTCTGCCATCGCAGATGGTTCATTATCTGACAAAATGCTATGTGTCTGTGAACAGTGTGGAGATATGCCTGTTGGATAAACTGAGTCATCCCTTTTTGAGCCCTGGAGACTTCAATTTGTGGTGtcttttaaatctatataaatCAAGTAACCAAGTATAAAATAAGTGTACTGTTGGATTCTGTCAAGTTTACACCCAGGAGGGTAGGGATTGAATTATGTTTATAGTTGAGAGTTTCTTGAAATCAAAAGTTAGAGAGCATGGCACCATCAAACCCTGAAGTATTCCAagttaaaatgacaattaaaaaaatcaaattaaaacccTAAAAAAATACTAACATAGAGGCATGTNNNaaaaaaaaaaaaag

Function

GO:

id name namespace
GO:0006099 tricarboxylic acid cycle biological_process
GO:0006101 citrate metabolic process biological_process
GO:0009060 aerobic respiration biological_process
GO:0015980 energy derivation by oxidation of organic compounds biological_process
GO:0045333 cellular respiration biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017631 False 633 mRNA 0.48 6 14477947 14484818
TU114641 True 1220 TUCP 0.42 3 14433158 14479787

Neighbor

gene id symbol gene type direction distance location
AMCG00017627 NA coding downstream 154993 14271536 ~ 14278165 (-)
AMCG00017625 NA coding downstream 246708 14134911 ~ 14186450 (-)
AMCG00017623 NA coding downstream 365619 14045880 ~ 14067539 (-)
AMCG00017622 NA coding downstream 415566 14009914 ~ 14017592 (-)
AMCG00017624 NA coding downstream 462188 13911085 ~ 13970970 (-)
AMCG00017629 NA coding upstream 7711 14492529 ~ 14505953 (-)
AMCG00017630 NA coding upstream 22755 14507573 ~ 14523275 (-)
AMCG00017633 NA coding upstream 45978 14530796 ~ 14552257 (-)
AMCG00017635 NA coding upstream 114465 14599283 ~ 14600616 (-)
AMCG00017634 NA coding upstream 124092 14608910 ~ 14612595 (-)
G91850 NA non-coding downstream 388631 14044121 ~ 14044527 (-)
G91576 NA non-coding downstream 1776825 12656069 ~ 12656333 (-)
G91562 wdr1,LOC106565198 non-coding downstream 1911944 12517080 ~ 12521214 (-)
G91556 wdr1,LOC107717326,LOC106583413 non-coding downstream 1924015 12506627 ~ 12509143 (-)
G91553 NA non-coding downstream 1933211 12496291 ~ 12499947 (-)
G92006 NA non-coding upstream 315272 14800090 ~ 14800401 (-)
G92024 NA non-coding upstream 439575 14924393 ~ 14925960 (-)
G92049 NA non-coding upstream 569645 15054463 ~ 15054684 (-)
G92050 NA non-coding upstream 570474 15055292 ~ 15056623 (-)
G92051 NA non-coding upstream 572125 15056943 ~ 15057146 (-)
AMCG00017582 NA other downstream 2110788 12307781 ~ 12322370 (-)
AMCG00017569 NA other downstream 2532558 11877360 ~ 11900600 (-)
AMCG00017563 NA other downstream 2926338 11504024 ~ 11506820 (-)
AMCG00017556 NA other downstream 3936054 10361300 ~ 10497104 (-)
G91119 NA other downstream 5677251 8755288 ~ 8755907 (-)
AMCG00017638 scoc,LOC103463814,LOC103132857 other upstream 275250 14760068 ~ 14764832 (-)
G92124 LOC101154678 other upstream 1382129 15866947 ~ 15867647 (-)
G92129 NA other upstream 1545584 16030402 ~ 16030905 (-)
AMCG00017663 NA other upstream 2902666 17387484 ~ 17395049 (-)
AMCG00017665 NA other upstream 2983787 17468605 ~ 17487497 (-)

Expression


Co-expression Network