AMCG00017635


Basic Information

Item Value
gene id AMCG00017635
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 14599283 ~ 14600616 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017635
atgatgaaaataatgCACGATTGTGTTCAGCTCAGTAATGAAAAAGGTTCTGTCATTGCTACTTACCCAGCTGAGAAACTAGCCTTCAGTGCTGTGTGCCCTGATGACAGAAGGTTCTTTGGATTGGTCACCATGCAAGCTACAGATGATAATAGTTTGactaaagaagaagaaagtgcGCTGAGGACTTCTTGTCATGTCTTTATTGTTGACCCAGAGCTCTGTCATCATAAGGTACATCAAGGCATTGCCAGGCGCTTTAATTTTGAGTGTACTCCTGATCCTGACGTCAGTGGCTGCTTGGAATTTCCCCTGACATCCCAGCCTATCTTGCAGTTTGTCTCTGTGCTCTACCGTGACATGGGGGAGTCCATAGAAGGGATGCGCACCAGAGCTTTCTTTGATGGAGATAGTGATGCCCAGCAGAATAACAGCACCAGCAGCAACAGCGACAGTGGGATTGGAAACTTCCTCCCCGAAGAGAGAAACAGTCGAGTTATCTTGGTTGACCTGGGAAGCACACCAAGCCGGCACATCCCCAATGGTCTAAGGGAAAACCCTCAGATAAGGAACCCAAATCAAGCTGCGGCACACTGGAATGGCTATCGCTATGAACAAGAAGGGAAGTATCATTTAGCTGAGCCTCCCCACCCTGATGCCTCCCATATCCCTGGGAGGCATTTTGGTCCTTCTGCTAGGATTGAGGTTCCAGTCCAGCCAGCTAGGCCTCTTTACCCTCCTGGTAAAAAAGCAGGCGCGGCAGGAGCAGGCCAGTCTGGCGGTCAGCGCTGGCTTCCTGTTCATGTATTGCGAGACTGGCAGCAAGGCAACAGCAGCGACCAGGAGTCATATGCGGAGTCCACTGATGGCTGGTCAAGTGCTAACTGCAGCACACTGCCTCCTCCAATGAGCAAAATCCCAGCTGACCGATACAGGGTCGCAGGGGAAATAGTGAAGCCTTCTCGACTCACTGCTCAGAAGGATGAGTGGACCAAAAAGATATTTGGTGCCGAGAAAGTGTTTGCAGACCAGCAGAAGGGCAAAAGGACCAAAGAGGGTGAAAAAAAGAATGGAGATTAA

Function

GO:

id name namespace
GO:0043547 positive regulation of GTPase activity biological_process
GO:0007165 signal transduction biological_process
GO:0005886 plasma membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005096 GTPase activator activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017635 True 1080 mRNA 0.50 2 14599283 14600616

Neighbor

gene id symbol gene type direction distance location
AMCG00017633 NA coding downstream 47026 14530796 ~ 14552257 (-)
AMCG00017630 NA coding downstream 76008 14507573 ~ 14523275 (-)
AMCG00017629 NA coding downstream 93330 14492529 ~ 14505953 (-)
AMCG00017627 NA coding downstream 321118 14271536 ~ 14278165 (-)
AMCG00017625 NA coding downstream 412833 14134911 ~ 14186450 (-)
AMCG00017634 NA coding upstream 8294 14608910 ~ 14612595 (-)
AMCG00017632 htt coding upstream 13945 14614561 ~ 14657488 (-)
AMCG00017639 grk4 coding upstream 64265 14664881 ~ 14676075 (-)
AMCG00017646 NA coding upstream 402830 15003446 ~ 15012768 (-)
AMCG00017645 rab33b,LOC102236194,LOC106911658,LOC101473034,LOC100689790,LOC102313972 coding upstream 443054 15043670 ~ 15052663 (-)
G91850 NA non-coding downstream 554756 14044121 ~ 14044527 (-)
G91576 NA non-coding downstream 1942950 12656069 ~ 12656333 (-)
G91562 wdr1,LOC106565198 non-coding downstream 2078069 12517080 ~ 12521214 (-)
G91556 wdr1,LOC107717326,LOC106583413 non-coding downstream 2090140 12506627 ~ 12509143 (-)
G91553 NA non-coding downstream 2099336 12496291 ~ 12499947 (-)
G92006 NA non-coding upstream 199474 14800090 ~ 14800401 (-)
G92024 NA non-coding upstream 323777 14924393 ~ 14925960 (-)
G92049 NA non-coding upstream 453847 15054463 ~ 15054684 (-)
G92050 NA non-coding upstream 454676 15055292 ~ 15056623 (-)
G92051 NA non-coding upstream 456327 15056943 ~ 15057146 (-)
AMCG00017631 NA other downstream 114465 14433158 ~ 14484818 (-)
AMCG00017582 NA other downstream 2276913 12307781 ~ 12322370 (-)
AMCG00017569 NA other downstream 2698683 11877360 ~ 11900600 (-)
AMCG00017563 NA other downstream 3092463 11504024 ~ 11506820 (-)
AMCG00017556 NA other downstream 4102179 10361300 ~ 10497104 (-)
AMCG00017638 scoc,LOC103463814,LOC103132857 other upstream 159452 14760068 ~ 14764832 (-)
G92124 LOC101154678 other upstream 1266331 15866947 ~ 15867647 (-)
G92129 NA other upstream 1429786 16030402 ~ 16030905 (-)
AMCG00017663 NA other upstream 2786868 17387484 ~ 17395049 (-)
AMCG00017665 NA other upstream 2867989 17468605 ~ 17487497 (-)

Expression


Co-expression Network