AMCG00017637


Basic Information

Item Value
gene id AMCG00017637
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 14725976 ~ 14746229 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017637
TCGCACACCTTGCTGCCGGTGACCCAGGTGCAGGCAGCTCCAGCCCGGGGCCCAGCTCTGGTGTTTACGGCCTCAGATCACTACCAGGCTGAGGGCCACATCGTGCGCAGATCACTGGATACCCGACACATTGGCCAGCAAGTCTCCCTTGTGCTGGGCATTCCCACCGTGAAGCGAGAGAAGCAGAGCTACCTTCTTAGCACACTGAGCTCACTTTTGTATGATCTGACTTCAGAGGAAAAGGACGATTGTTTAATAATTATCTTCGTTGCTGAGgcTGATGCCCAGTATGTTTACAGTGTAGCAGATGATATTAAGAAAAAATTTCCACATGAAGTGCAGTCTGGTCTTATGGAAGTTGTGTCCCCGTCTCCTTATTTCTACCCGGACTTCAGCAATCTGAAGGAAACATTTGGAGACTCAAAGGAAAGAGTAAAGTGGCGAACCAAACAGAATTTGGATTACAGCTTCTTGATGCTCTACGCAAAGGATAAAGGGTCTCTTTATGTACAGTTGGAGGATGATATTGTGGCAAAACAAGGATATTCGCAGACCATGAAGGAATTTGTGCGTCATCAATCATCCGACGATTGGCTGATTTTAGAATTTTCACAGCTGGGGTTTATAGGTAAAATGTTCAGGACATCAAATCTTCCTTTTATAGTGGAATTCATTTTGATGTTCTACAAAGACAAGCCCATTGATTGGTTGCTGGATCATATATTGTGGGTTAAAGCCTGTAACCCAGAGAAGGATGCAATACACTGCAGCAGACAGAAGGACAACCTGAGAATCCGTTACAAGCCATCCCTTTTTCAGCATGTTGGACTTCACTCGTCGCTGCATGGAAAAATTCAAAACTTAAAAGATAAAGATTTTGGAAAGCAGACACTGTACATAAGCCACTCCAACCCACCAGCAGAAGTTACCACTAGTCTGTCTGCCTACCAGAGCCACACTCTCGACCGGGCCTACCAGGGAATGGATTTCTTCTGGGGCCTCACACCAGTTGCTGGGGACTACATCAAAATCAAATTTGTCAAGCCTTTGATAGTAAAAGGATACCTTTTTAAAAGTGGAAATATTGAGACTAACGGAGACCAGTTCTACAACACAACTGTGGAAGTTCTTTGTGAAAATagttCAGTTTTGAATAATGCACATAATGGACAGATGTCTAAATATGAGACAACCACTGATGGCTATTTAAGAATAGGCGCCTTTGAGGATGGTGTCGCTGCAGGAGAGATTCCCCCTGCATTACAGAACATATCTGCCATTCGGTTGTTAATCCACTCCGATTCAGATGTCTGGGTTCTGCTGAGTGAGATACTCATTAAGGTGTAAAAAGAAGAACCACCAAAACAAAAGGGGTAAATACTGAAGCATTACATGTGAAGCCCAGTTCCAGGAACAGTGGACACCTGTACAAGGGTACCACCTAGTGGAGGAAGCCAGAGAAAATGGGTTTCAGCTTGCTGCCcataacatacacaaaaaatatgaagctgaaaatgtgaacCAGAGGAAACTTGCCAATTCTGCACAACAAAATGAATATTTGAaggcatttttgtattgcttggAATATGGTGTCATGTCAAACCCACTTCGAtggggatttttgtttttaggatttattttgaatgactgtaaaaaaaaaaaaaaaactggggtTGGAAATGCTCTGAAGGCTTTACATGTGTCATGATGGAGAAGGATTCTAAACATTAAACTGGAAAAGCCTTATGAAGAGAGATTGAagaagaaacatgttttaaattaaaatatgaagttgGCAAAGGACCTATTTAAGATCAATGTGTGCTATAAATACAACTctttagttaaaaataatattacaaaatatgttttttgataGTTAATATgtaactttctctctctctatgtatatatgtgtgtgtgtaatatatatgtgtgtgtgtgtgtatatatatatatatatatgcgcgcgtgtgtgtgtgtgtgtatatatatataatatgagaGAGCGATCACTTGCATTGTTTACTGTATTCAATTTGCAATACATCTTGCTCTTCCTCTCTTTTAGTGTAGTTGCTATATAGATAAAGCTATTATTTCTTGCAATGTTAACTGCATCTGCCCTTcaacagtgtgtttatttaacagTGCGCAGGTGCTCAAAACCAAAATAGACATGCAAAACCCAAAATAAATACCAGGCTCCTTATTGAGCCTAAAATTACATACACAGGTCCCTACCTAAACATGCACTAATAATAAACTCAAGCAGTCAAGTCCCAAATCTGTATCCGTATTCAAACCCAAGTTCAAAGTCTGTTTCTGTGATTGCAACTGTTCTTGACCTCTGGCTCTGTTCACTCTCCACACACTCCCATGCTTTCCTCTCCGCCTAATAGCTTCCAGTTTTATTGAGTGGTGGAGCCAGTCATGGTGGGGGACAGCGCTCAGGTCCCCCAGGTAATTTTCCTCCCCCGGGGTCCGGGGAGGTGCTGGGCAGTTCTTAAATCCCACACATATCTATGTAtactttgtaaatgtattaaacttgtgtaggaaataaatgtcaaatatttacatgctCATCAAGACTAACTCattgtttgatatttatttgcTGTAATAAGAGATTGTGTGTGTCATTAGAGATCAAGAGAACAcaatcaagtaaaaaaaaacaatgttacaaaATTGTTAGAATTGTTATAACGCACATTGGTAAACACAAAGATGCAAATCaaattcttttttaaatacatcctGTATTCAACTGAGAAAAGTGGCAAATGTTTAACGTTTGAAAATCAATTCCGTCTGACTGTAGTAATGCCAAGAAATATGaaggctttctttttttttttttaagttaaacattttggattctatttttctttatagaggaaacaatgtttttagttttgtttgagaaccattatttaataaaattaattttacaatcA

Function

GO: NA

KEGG:

id description
K00738 MGAT4A_B; alpha-1,3-mannosylglycoprotein beta-1,4-N-acetylglucosaminyltransferase A/B

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017637 True 2966 mRNA 0.39 13 14725976 14746229

Neighbor

gene id symbol gene type direction distance location
AMCG00017628 NA coding upstream 252616 14467590 ~ 14473360 (+)
AMCG00017621 NA coding upstream 574197 14135600 ~ 14151779 (+)
AMCG00017626 gpr78,LOC106608662,LOC105020663 coding upstream 593513 14129633 ~ 14132463 (+)
AMCG00017618 NA coding upstream 641540 14068774 ~ 14084436 (+)
AMCG00017619 NA coding upstream 716720 13993591 ~ 14009256 (+)
AMCG00017636 NA coding downstream 2452 14748681 ~ 14764827 (+)
AMCG00017640 maml3,LOC107712021,LOC107671314 coding downstream 78305 14824534 ~ 14825214 (+)
AMCG00017641 NA coding downstream 176033 14922262 ~ 14931595 (+)
AMCG00017649 NA coding downstream 234335 14980564 ~ 14996066 (+)
AMCG00017642 setd7 coding downstream 275502 15021731 ~ 15033505 (+)
G91931 NA non-coding upstream 186872 14518232 ~ 14539104 (+)
G91849 NA non-coding upstream 681448 14044084 ~ 14044528 (+)
G91740 NA non-coding upstream 812219 13858217 ~ 13913757 (+)
G91727 NA non-coding upstream 1192766 13528781 ~ 13533210 (+)
G91726 NA non-coding upstream 1199827 13522641 ~ 13526149 (+)
G92005 NA non-coding downstream 53862 14800091 ~ 14800376 (+)
G92016 NA non-coding downstream 197154 14943383 ~ 15036381 (+)
G92038 NA non-coding downstream 316068 15062297 ~ 15085398 (+)
G92039 LOC107556532,LOC102237872,LOC107674234,LOC107737080 non-coding downstream 319908 15066137 ~ 15067818 (+)
G92059 NA non-coding downstream 416101 15162330 ~ 15162692 (+)
AMCG00017620 htra3,LOC106577909 other upstream 686913 14025636 ~ 14039063 (+)
AMCG00017615 sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 other upstream 895157 13781266 ~ 13830819 (+)
AMCG00017600 NA other upstream 1466216 13196895 ~ 13259760 (+)
G91452 cc2d2a other upstream 2845477 11879614 ~ 11880499 (+)
G91281 LOC103376870 other upstream 5142696 9519773 ~ 9583280 (+)
G92046 NA other downstream 331096 15077325 ~ 15084278 (+)
AMCG00017651 NA other downstream 341903 15088132 ~ 15090829 (+)
AMCG00017652 NA other downstream 346962 15093191 ~ 15106835 (+)
AMCG00017650 NA other downstream 363193 15109422 ~ 15116031 (+)
G92123 LOC101154678 other downstream 1120802 15867031 ~ 15867634 (+)

Expression


Co-expression Network