AMCG00017641


Basic Information

Item Value
gene id AMCG00017641
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 14922262 ~ 14931595 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017641
ATGTCCCACTCTTCTGTGGGTAGTAATCTCGAGTCAAAAGATAAGAAGGAGCTTCAAGAAACTGTGAAAAGGAAACTGGACAGTGCGCGATCACCTCTGAATGGGGACCAGAATGGTATTTGTGATGGGAATTTTTCACCAAATACAAAACGTCTCCGAAAGGAAGGGCCCAGCCTGGACTCATTGGCAGGATTGCCTAGTAATGGGCCCCCTGTGCCCTCTGTATCACCCCTTCACCAGATTGATATCAAGCCTACATTACCCATGAACAATGCCAACAGTGGCAACAACCATGTCCCCGGCCGGCCGGATGACCTGGGCAAAAATGGAGGGTTGCAGGATATCAAGCTGCAGGTCAATGGCACCTTGGACGATGGATTCAGTCTAATTCAGAGTAAGGATATGAAGCCAGAGCCCTTAGATGATGCCACAGGGATCGAGTCCCCTGACAGCTCGCTCTCGAACCAGAACAAGCTCTTCTCGGACATCAACCTTAATGACCAGGAATGGCAGGAGCTTATTGATGAGCTGGCCAATACTGTGGCTGAAGATGACATGCACGACCTATTCAATGAAGACTTTGAAGACAAAAAGGAGGTAGAGTTCACTAGGCCAGCTGCCCAAACCCCTCTCCTGCAGGAACCCGCCCCgcctcccccacccccgcccccgaACAACCAGATGCCTATGGGTTCCCCACAAGTACGACCTTCCTCTTCCGGGCCTCAGTTCAACACCGCATCCAACAGCACGCCTCCCCAGCAGCCACTACAGCAGCCTCCCACTGTTGGAATGGCAGCAGGCTCACCAGCAAACTGTGTGGCCCGGTCACCACAAACTCCAAACCAGGCCCAGACACAACCACCAAGGCCTGGGAATGGTATTTTGATGAACCCAGGGTCTGGAGTAGTACCAGGCACGGGTTCTGGAGCAGTGGCAGCAGCTGCAGGCCAAGGGGGAATCGTCCCAGTATCAGTCCCAGTCCCAGTTCCATCATCCACTCCAGACTTGTCTCCAGCTGAGCAGTTGAAGCAGATGGCTGCTCAGCAGCAGCAAAGGGCAAAACTCATCCAGCAGACGCAAGCACCCAACTGGTCCCCTGCTGGCCCTCCAACCAGCCCATATGGGGGACCCTTCAACCCTGACAAACCAAATAGCCCAATGGTGTATCCACAAGCCTTTAACTCCCCAAACCCTATGGTGCCTTCAATGGCAAGCAACCCTCAGAAGGCCACTATGAATAACTACCTCCCTCAAAACCACATGAACATGATCAACCAACAGCCAAACAGCATGGGCCAAAACACTATTAACAAGCAACAGGCCGCTATGCTGTCCTACAGCAACACTAAGCCCCTAACCCATTTCAGCGCAGTTGAGCACATGGGTCAGAGGATGACCCCTCCGATGGCCAACCCCAATAAGAACCCCATGATGCCCTACATGCAGCAGCAGGCAgcgcagcagcaacagcagcagcagcaacaggtGCCGCCACAGAGCCAAGCGCAGATATCTGCTCAGGCCCCTCACCTGAGTGAagaacaaaaatgcatacttttcATGAAACAGAAAGCACGGAATCAGGGTATGCCTTACAGTGCAATGCAACCTCACAGCCAGcagcagcagagatATTGCTGTCTCTGGTTAGGGAAGCTCTGCCAGCACTCGCCCGCACGTGTCGAGGCTTGA

Function

GO: NA

KEGG:

id description
K06061 MAML; mastermind

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017641 True 1695 mRNA 0.54 3 14922262 14931595

Neighbor

gene id symbol gene type direction distance location
AMCG00017640 maml3,LOC107712021,LOC107671314 coding upstream 97048 14824534 ~ 14825214 (+)
AMCG00017636 NA coding upstream 157435 14748681 ~ 14764827 (+)
AMCG00017637 NA coding upstream 176033 14725976 ~ 14746229 (+)
AMCG00017628 NA coding upstream 448902 14467590 ~ 14473360 (+)
AMCG00017621 NA coding upstream 770483 14135600 ~ 14151779 (+)
AMCG00017649 NA coding downstream 48969 14980564 ~ 14996066 (+)
AMCG00017642 setd7 coding downstream 90136 15021731 ~ 15033505 (+)
AMCG00017644 NA coding downstream 105710 15037305 ~ 15042799 (+)
AMCG00017643 NA coding downstream 121771 15053366 ~ 15062281 (+)
AMCG00017653 NA coding downstream 199828 15131423 ~ 15156693 (+)
G92005 NA non-coding upstream 121886 14800091 ~ 14800376 (+)
G91931 NA non-coding upstream 383158 14518232 ~ 14539104 (+)
G91849 NA non-coding upstream 877734 14044084 ~ 14044528 (+)
G91740 NA non-coding upstream 1008505 13858217 ~ 13913757 (+)
G91727 NA non-coding upstream 1389052 13528781 ~ 13533210 (+)
G92016 NA non-coding downstream 11788 14943383 ~ 15036381 (+)
G92038 NA non-coding downstream 130702 15062297 ~ 15085398 (+)
G92039 LOC107556532,LOC102237872,LOC107674234,LOC107737080 non-coding downstream 134542 15066137 ~ 15067818 (+)
G92059 NA non-coding downstream 230735 15162330 ~ 15162692 (+)
G92095 NA non-coding downstream 595966 15527561 ~ 15527878 (+)
AMCG00017620 htra3,LOC106577909 other upstream 883199 14025636 ~ 14039063 (+)
AMCG00017615 sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 other upstream 1091443 13781266 ~ 13830819 (+)
AMCG00017600 NA other upstream 1662502 13196895 ~ 13259760 (+)
G91452 cc2d2a other upstream 3041763 11879614 ~ 11880499 (+)
G91281 LOC103376870 other upstream 5338982 9519773 ~ 9583280 (+)
G92046 NA other downstream 145730 15077325 ~ 15084278 (+)
AMCG00017651 NA other downstream 156537 15088132 ~ 15090829 (+)
AMCG00017652 NA other downstream 161596 15093191 ~ 15106835 (+)
AMCG00017650 NA other downstream 177827 15109422 ~ 15116031 (+)
G92123 LOC101154678 other downstream 935436 15867031 ~ 15867634 (+)

Expression


Co-expression Network