AMCG00017646


Basic Information

Item Value
gene id AMCG00017646
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 15003446 ~ 15012768 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017646
GAGCCTGGGTTGAGCAAGTTTTTAAGCAATCACAATATATCAAGAGCATGGCTGAACAACCCGTCCTCCTGGCTGCGGTGACACTGCTTTCTGCCCTCCACCTGGGTTACCTGGCAGGGAGGGTAGGAAAAGCTAGGAAGAAGCATACAATTGTGCCGCCATCAGTCACTGGTCCCCCTGAGTTTGAGAGAACTTTCCGTGCACATCAAAACTGCGTCGAGTTTTATCCAGTTTTTCTTGTGGTGCTCTGGACGTCTGGCATCTTCTTCAGCGAAGtgctaGCTGCTGTCCTCGGCCTTATTTACATCTATTCTcgacaaatgtattttgatggCTATACAGTCTCTGTTAAAGACAGGATGCCGGGGTTTTCCTTGAGTATCGGGCTTGTATTTACACTCGCAGGACTGGGTGCAGCTGGAGTTCTCAATGGAATCCTTGATGAGTACTTTGATATCAACGTGAGAAAGATGATTTCTAAATGGTAGAAGAGCAGCTGAAGGCTACCTTAAAAAGGGATCTCTTTACTGTATGaagatattttaattggttgttttaatgttatccTTAAGATTAAGCACAGTTCTACTGTTGACCTTGGTGTGCCTAACTTGGAGTTTGTAATGACTGTCTTTACCATGTGATCATTTCAGGGGCTACAATAAGAGTTCACTGTATTCCATTCATCTAAGGTTTAGACGTTCTGCTTCCACAAGGCTCTGCACATTATGGTATCGCATTGTATGCATTACACAAATATGTatctattaaatatattctaATGAAATGTCCCACAAGAAGTGTGGAGCTAatagtattttatgtatgtttgtactCTCTAAGAAGCTCTTTTAATGTGTGCCTTTTGGAGCGCTCGGGGGAGTGGGGAACTCTGACCCTACACCTGCAACCCCTCTGCATTTCAAAAACCATTCTATAGTCTCTATACtcagtgttattattaagtGAATctgtaacaattaaaaaatctgCCAATAAAAGTTAACCAGTGATAAAATTACCAAGGAAACAAAGGAAAGAACATTCACAACCAAGAATGACAAATAATGAACAGGTCAGTCAGACTTCTGGTCTATAAAAAGCAATGCCAATGTTTAGAGCACAACAAGTTTTCAAactttttctgctttaaaatgtttgcttctcCAGCTTTCTCAGGCAGCTTAAGTGagttggtttgtgtttttcttgggGTCAGTGCTGGCttgagaagaaagtcaagtgtCAGGGGATTATAAATGACAACTCGCTTCTGGGTGAACTTGTATCCTTGATTCAGCCTGAAGTGAGGcactgctgctgtgctgtgttggttGCCGATTAGGttactgtttttaaagtattgccTACATGGAGAGTTTTCTAATGTTGAAGGCGTTTGTTTCAAAGGCTATACTAgagcataataaaacacaagcaAGTGAACAAACAAGTAAGGCTGTAATCGAGTATTAGGGTAAACAATGCTTGGAAGCACAGAAGAAATATCTCCAGCAGATGAAACCAGAGGGGAGACTTGATTGAGGTCTTTGAAGTGCACACATCAAAACACCTGATAGGTCACTAGGGATTGGAGTGCTTGTGATGTCTGTGATGAAACAGTATAGGATGTGATAACTAAGTGTATACCATGACACAATCCAAGGCCTTTAAAAACAGCTCCTGGAAGTTGGGTTTCAGTGCAATCAATCAGGACTCTATTCTACACTACCAGCTCTGTGGGTCCTATTAGCACAGTGCTGGATGAGAAATTGAGAGGGCTGCGTGGAGCCGGAGACTAACCTGCTGTTTTAAGTTGCTGTTTAATTGGCAGCAAATGGATAATAGTGGGAGTTATCTTTTCTTAAATGTCA

Function

GO:

id name namespace
GO:0006691 leukotriene metabolic process biological_process
GO:0043085 positive regulation of catalytic activity biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016740 transferase activity molecular_function
GO:0008047 enzyme activator activity molecular_function

KEGG:

id description
K00799 GST, gst; glutathione S-transferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017646 True 1874 mRNA 0.41 5 15003446 15012768

Neighbor

gene id symbol gene type direction distance location
AMCG00017639 grk4 coding downstream 327371 14664881 ~ 14676075 (-)
AMCG00017632 htt coding downstream 345958 14614561 ~ 14657488 (-)
AMCG00017634 NA coding downstream 390851 14608910 ~ 14612595 (-)
AMCG00017635 NA coding downstream 402830 14599283 ~ 14600616 (-)
AMCG00017633 NA coding downstream 451189 14530796 ~ 14552257 (-)
AMCG00017645 rab33b,LOC102236194,LOC106911658,LOC101473034,LOC100689790,LOC102313972 coding upstream 30902 15043670 ~ 15052663 (-)
AMCG00017647 LOC108434806,LOC107737080,LOC105908469,LOC107712022 coding upstream 50659 15063427 ~ 15074519 (-)
AMCG00017648 naa15,LOC105908469,LOC108263533,LOC108434806 coding upstream 63055 15075823 ~ 15080306 (-)
AMCG00017660 tada2b coding upstream 200729 15213497 ~ 15213745 (-)
AMCG00017659 NA coding upstream 210734 15223502 ~ 15234769 (-)
G92024 NA non-coding downstream 77486 14924393 ~ 14925960 (-)
G92006 NA non-coding downstream 203045 14800090 ~ 14800401 (-)
G91850 NA non-coding downstream 958919 14044121 ~ 14044527 (-)
G91576 NA non-coding downstream 2347113 12656069 ~ 12656333 (-)
G91562 wdr1,LOC106565198 non-coding downstream 2482232 12517080 ~ 12521214 (-)
G92049 NA non-coding upstream 41695 15054463 ~ 15054684 (-)
G92050 NA non-coding upstream 42524 15055292 ~ 15056623 (-)
G92051 NA non-coding upstream 44175 15056943 ~ 15057146 (-)
G92067 NA non-coding upstream 131767 15144535 ~ 15144735 (-)
G92069 NA non-coding upstream 149550 15162318 ~ 15162712 (-)
AMCG00017638 scoc,LOC103463814,LOC103132857 other downstream 238614 14760068 ~ 14764832 (-)
AMCG00017631 NA other downstream 518628 14433158 ~ 14484818 (-)
AMCG00017582 NA other downstream 2681076 12307781 ~ 12322370 (-)
AMCG00017569 NA other downstream 3102846 11877360 ~ 11900600 (-)
AMCG00017563 NA other downstream 3496626 11504024 ~ 11506820 (-)
G92124 LOC101154678 other upstream 854179 15866947 ~ 15867647 (-)
G92129 NA other upstream 1017634 16030402 ~ 16030905 (-)
AMCG00017663 NA other upstream 2374716 17387484 ~ 17395049 (-)
AMCG00017665 NA other upstream 2455837 17468605 ~ 17487497 (-)
AMCG00017675 NA other upstream 2768880 17781648 ~ 17789749 (-)

Expression


Co-expression Network