AMCG00017648 (naa15,LOC105908469,LOC108263533,LOC108434806)


Basic Information

Item Value
gene id AMCG00017648
gene name naa15,LOC105908469,LOC108263533,LOC108434806
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 15075823 ~ 15080306 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017648
ATGCCTGCTTTTGTATCCTTCAcaataatcatgttttcttCCTGTCTGTTTTCAAAGAGATGTTATGAACACAAGCAGTACCGAAATGGCCTGAAATTCTGCAAACAGATCCTCTCCAACCCCAAGTTTGCAGAGCATGGAGAGACTCTGGCAATGAAAGGACTAACCCTCAACTGTCTGGGCAAGAAGGAGGAAGCTTACGAGTTAGTAAGACGAGGCCTACGTAACGATCTCAAGAGTCATGTCTGCTGGCATGTGTATGGTCTGCTGCAGAGGTCGGACAAGAAGTACGACGAAGCCATCAAATGTTAcagaaatgcactgaaatggGATAAAGACAATCTCCAGATTCTGAGGGACCTTTCCCTACTGCAGATTCAGATGAGGGACCTTGAGGGATACAGGGTAAGGGCTCACAGATTAGCAGTAACCTCTGTAATATAG

Function

symbol description
naa15 Enables RNA binding activity. Contributes to acetyltransferase activity and ribosome binding activity. Involved in several processes, including N-terminal protein amino acid acetylation; positive regulation of transcription, DNA-templated; and protein stabilization. Located in cytosol and nuclear body. Part of NatA complex and transcription regulator complex. Implicated in autosomal dominant mental retardation 50.

NR:

description
PREDICTED: N-alpha-acetyltransferase 15, NatA auxiliary subunit

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017648 True 444 mRNA 0.45 4 15075823 15080306

Neighbor

gene id symbol gene type direction distance location
AMCG00017647 LOC108434806,LOC107737080,LOC105908469,LOC107712022 coding downstream 1304 15063427 ~ 15074519 (-)
AMCG00017645 rab33b,LOC102236194,LOC106911658,LOC101473034,LOC100689790,LOC102313972 coding downstream 23160 15043670 ~ 15052663 (-)
AMCG00017646 NA coding downstream 63055 15003446 ~ 15012768 (-)
AMCG00017639 grk4 coding downstream 399748 14664881 ~ 14676075 (-)
AMCG00017632 htt coding downstream 418335 14614561 ~ 14657488 (-)
AMCG00017660 tada2b coding upstream 133191 15213497 ~ 15213745 (-)
AMCG00017659 NA coding upstream 143196 15223502 ~ 15234769 (-)
AMCG00017661 pcdh10,pcdh10a,LOC106604685,LOC104931883 coding upstream 1705362 16785668 ~ 16797841 (-)
AMCG00017664 NA coding upstream 2345105 17425411 ~ 17462601 (-)
AMCG00017670 NA coding upstream 2434577 17514883 ~ 17531328 (-)
G92051 NA non-coding downstream 18677 15056943 ~ 15057146 (-)
G92050 NA non-coding downstream 19200 15055292 ~ 15056623 (-)
G92049 NA non-coding downstream 21139 15054463 ~ 15054684 (-)
G92024 NA non-coding downstream 149863 14924393 ~ 14925960 (-)
G92006 NA non-coding downstream 275422 14800090 ~ 14800401 (-)
G92067 NA non-coding upstream 64229 15144535 ~ 15144735 (-)
G92069 NA non-coding upstream 82012 15162318 ~ 15162712 (-)
G92093 NA non-coding upstream 404951 15485257 ~ 15485762 (-)
G92132 LOC104962440 non-coding upstream 1055074 16135380 ~ 16135707 (-)
G92134 NA non-coding upstream 1086333 16166639 ~ 16182063 (-)
AMCG00017638 scoc,LOC103463814,LOC103132857 other downstream 310991 14760068 ~ 14764832 (-)
AMCG00017631 NA other downstream 591005 14433158 ~ 14484818 (-)
AMCG00017582 NA other downstream 2753453 12307781 ~ 12322370 (-)
AMCG00017569 NA other downstream 3175223 11877360 ~ 11900600 (-)
AMCG00017563 NA other downstream 3569003 11504024 ~ 11506820 (-)
G92124 LOC101154678 other upstream 786641 15866947 ~ 15867647 (-)
G92129 NA other upstream 950096 16030402 ~ 16030905 (-)
AMCG00017663 NA other upstream 2307178 17387484 ~ 17395049 (-)
AMCG00017665 NA other upstream 2388299 17468605 ~ 17487497 (-)
AMCG00017675 NA other upstream 2701342 17781648 ~ 17789749 (-)

Expression


Co-expression Network