AMCG00017649


Basic Information

Item Value
gene id AMCG00017649
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 14980564 ~ 14996066 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017649
ATGGCAACCGGGGGCCCTTCTGAGATACTCACGGAGAGGGAGGAGGGCCAGTCGGGGCTTCAGAGCTGTAACCCCTCCTCTCAGTGCAAGACACAACtACATATGCATAAGCTTAACCTACTGGAGATGGCAATGAAAAAACCTAGTATCATGAGAGGCACAGCCAAAGTAATGGAGCAGAATGTAGTTGGCATCTCCCGGCAGGCTGGTGCTGTGCAACCAACACTACAAGGCCCAGGGACTGTGACGCCAGTGCCCAGCACCAACCCGGGGGCACCTGGTTACCTCGGCAACCAGCAGCAGGCAGCCATGATGAAGCAAATGTTACTGGAGCAGGAGAAGCAGAGAGTCCAGCTACACGTGATAGAGCAGCAAAAGCAGCAGCTTCTGAGGGAACAAaggcaacagcagcagcagatgctGGCGGAACAGGTAACGCGTGCTCCTCGGTGGACAGCcttaatgagagagagagagagagagagagacctgaaGAGGGTTCACGAGCACTTGAAGGAGCTGGAACTGGCAGCGAGGAACCAGGCTCTTCAGATCAGGAATGCCCATTTGCTTCAACAACAGCAAAGCCAAGGCATACTCCAGATGGCATCCATCCAGAACTCTGGCTCGATGCCAGCCGCGGCCGCCCAGTCCGAGATGAACATGGCGTACAGCAACACCCCCAGCAGCCAGCAGGGCATCTACAGCATGAATCCTGCAATGAACCAAATGTTGCAGCACCCAAACCAAAGCAGCATGAATATGTCCCACAACCCTTCACAGGGCCAGAGACAACCCAGTGCAGGACAAGGGGTTGGGATGGTTGGGGGTTATGGGCAAGGCATGTTGATCAACTCCGCCATGTCTCAGCAGCAAATGAAAGGACCACCTGTTGGCCAACCCATCCCCAAGGCCCAAGCACAGAGACTCCAGAGTATTATGGGAAATGCCGCCCAGGGGGCACAGGGCtggcagcaacagcagcagggACTGCAGGGCATGAGCGGGCGAACTAGTGGAGAAATGGTGGCCTTCAATAGTAATTCGGCATACGCCATGCAGCCTGGTCAGCCACGCATGACCAAGCAACACTTTCCTCAAGGAATGAACCAGCCTATTGTGGATCCCAGAGCCATGAACCCTGCAATGAGTGGGCAGATGATGCCCCATATGTCTGGCCAACCAAGGACCAACCAGCCCCGGCCCATGGTCATGGCTGGAATGACCCAGGGTGTTCCCAATATGACTCCTTTTAACCAAGGCCCTGGCCAGCAGATGGCAGGTGGTGGTGCCTCTTACGTGCAAGGCAGTCAACCACAGGGCTACCAGCGGACATCAAGTCAGGACTTGTCTTACAGTTATAGCAGCCAGCCGGCCAGCGGGGGCTCCTTTAATATACCCGACGGGGCTGACCTGGACTCAACGGATGGGTGGATGGACGAGTTCTTTCCGAGCCAATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017649 True 1461 mRNA 0.56 4 14980564 14996066

Neighbor

gene id symbol gene type direction distance location
AMCG00017641 NA coding upstream 48969 14922262 ~ 14931595 (+)
AMCG00017640 maml3,LOC107712021,LOC107671314 coding upstream 155350 14824534 ~ 14825214 (+)
AMCG00017636 NA coding upstream 215737 14748681 ~ 14764827 (+)
AMCG00017637 NA coding upstream 234335 14725976 ~ 14746229 (+)
AMCG00017628 NA coding upstream 507204 14467590 ~ 14473360 (+)
AMCG00017642 setd7 coding downstream 25665 15021731 ~ 15033505 (+)
AMCG00017644 NA coding downstream 41239 15037305 ~ 15042799 (+)
AMCG00017643 NA coding downstream 57300 15053366 ~ 15062281 (+)
AMCG00017653 NA coding downstream 135357 15131423 ~ 15156693 (+)
AMCG00017655 NA coding downstream 197636 15193702 ~ 15194164 (+)
G92005 NA non-coding upstream 180188 14800091 ~ 14800376 (+)
G91931 NA non-coding upstream 441460 14518232 ~ 14539104 (+)
G91849 NA non-coding upstream 936036 14044084 ~ 14044528 (+)
G91740 NA non-coding upstream 1066807 13858217 ~ 13913757 (+)
G91727 NA non-coding upstream 1447354 13528781 ~ 13533210 (+)
G92038 NA non-coding downstream 66231 15062297 ~ 15085398 (+)
G92039 LOC107556532,LOC102237872,LOC107674234,LOC107737080 non-coding downstream 70071 15066137 ~ 15067818 (+)
G92059 NA non-coding downstream 166264 15162330 ~ 15162692 (+)
G92095 NA non-coding downstream 531495 15527561 ~ 15527878 (+)
G92133 NA non-coding downstream 1170576 16166642 ~ 16182070 (+)
AMCG00017620 htra3,LOC106577909 other upstream 941501 14025636 ~ 14039063 (+)
AMCG00017615 sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 other upstream 1149745 13781266 ~ 13830819 (+)
AMCG00017600 NA other upstream 1720804 13196895 ~ 13259760 (+)
G91452 cc2d2a other upstream 3100065 11879614 ~ 11880499 (+)
G91281 LOC103376870 other upstream 5397284 9519773 ~ 9583280 (+)
G92046 NA other downstream 81259 15077325 ~ 15084278 (+)
AMCG00017651 NA other downstream 92066 15088132 ~ 15090829 (+)
AMCG00017652 NA other downstream 97125 15093191 ~ 15106835 (+)
AMCG00017650 NA other downstream 113356 15109422 ~ 15116031 (+)
G92123 LOC101154678 other downstream 870965 15867031 ~ 15867634 (+)

Expression


Co-expression Network