AMCG00017701


Basic Information

Item Value
gene id AMCG00017701
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 18913165 ~ 18924436 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017701
GCGCTATGGCGCGGGTGGAGCGGGGGATCCTGGGAGCGCAGGGCGGGAGGGGCTGTGGATGCAAACCGGGCCCGGGCGGCCGGCGCTGACTCTCCCCGGCGCGCTGGGCTGGACTGCGCCTAGTTTTGCGTCTTCctctaaaataaagaacaatcTGCTACATTCGGCTactattacaaaaacaaaggtTCCTGGTGTTCGTTTGGGATTATAGCTCGATTCAGAACAGGCACCACATGCTTTTTCGTGGGATTTAACATATTGCACTGGGTTCCTCGCAACTGAACAACGTTATAAAACGATCCAAACTTGTTGCCCTGCTTTCGTGTGTGAGGGACTGAAGTCCTGGGCCGCCGGCTGTGCGGGAATGGAGGAAGACGAGGGCGAGAGACTCATCCCCGAGCCCGGCACAGATCTGGCGAAACTGCTGGAGTATAAGGTGTACAGACGGAGATGGTTCATCCTGGTGGTGATCTGCCTTCTCAACAGCTCAAACGCGATGATATGGCTGAGTTTTGCTCCAGTTGCTGATCAGACAGCCCAGTATTTTAATGTGACTCTGGATCAGATAAACTGGCTGTCTCTCATTTATATGGTTGTAGCCATTCCTGTAAGCTTTGGAACAACATGGATGCTCGACACTTTAGGACTCAAAACTTCGTTGATCCTGAGCTCCTGGCTGAACATGACCGGCAGTATCTTACGCTTCATCAGCATCTTGAGCAAATACCCCACCTGGCTTATGTTCTACCCTCTGCTGATGTTCGGCCAGACTCTGTGTGCCCTGGCCCAGCCACTTGTCATCTTCTCCCCTACTAAGATGGCAGCTCTGTGGTTTCCAGAGCACCAGAGAGCCACTGCCAATATGATCGCCTCTATGTCTAACCCTCTGGGAATTCTGTTTGCCAACATCTTGTCTCCTCTGATTGTGAAGAACGAAAGCGGCCTTCCGTTAATGttgggAATTTACGCTTTTCCAGCTTCCATTGCCTGTCTCCTAGCAACACTGTTCATCAGGGCGAGCGCTCCCCCAACACCCCCCTCCGCGAGTGCTGAAACGTCCAATTCAGAGCCTTTCCTGAAGGGAATGAAACTGctgctgaaaaacaaagcatacatGATTCTTCTGCTGTGTTTCGGCTGTGGCATCGCCATCTTCACCTGTTTCTCCACACTGCTTGAGCAGATCCTGTGTGTTAAAGGATACACGAACGACTTCGCGGGGCTTTGTGGAGCTCTCTTCATTGTGTTCGGCGTGGTGGGAGCTTTCCTTCTGGGGCTGTTTGTGGACAAAACAAAGAAGTTCACCGAAGTCACCAAAATCAACATGTGTCTTGCTGCACTGGCCTGCATTGCATTTGCACTGGTATCTCAGATGAAACATCAAAACTTTGCAATAGCTGCTGCCAGTTCGTTGTTTGGCTTTTTCGGATTCTCAATATATCCCGTTGCCATGGAGTTGTCAGTCGAGTGCTCCTACCCCATCGGAGAGGCCACATCAGCGGGCCTGATCTTCATATCTGGACAAGTCCAGTCCATTGTTTACATCATCCTGTTCCAGCTGATGACCAAGCAGATGGCAGAAGCACCCGATGTAACCTGCGCACTGGGAGACAATTCTCTGTTGAGCTGGAGAGTGCCGAATATGGTGATGGCAGCTATCCTCAGTGTGGGAGTTTGCgtctttgttgtcttttttcacacagaATACAAACGTCTCAAAGCAGAAGCATCTGTGACTCAAGGGGCAGACAGTAAACTGAACGATGACATTGATAATGTTGTAGAGACTGAGtgactgggagacacagcaccCATCTCCCACACTTTTCAACAACAGTCTCCTTTGGAGTTTGCAGAACAGTGGATTGTAAGAGGAGACCTCTGGGGAATACAAGGCTTGTTCTTTTATCAAAAAGAGACTAAACTTACTTCAGggtttttttccttccttttgctGCAGTTCTTGcatttaataatgattaaagtGCTGCTATTGCAGAACTGCAGTTACAGTAATGTTCCCCTCCCTTGAGTGCACCCACTGTGTTTTAACTGCAAACATCTGGTCAAATGTTTGCAAATAACAATTGatgattcattttgtttattccttGTGGCTTAACAAGAACTTTGGTCGCTCTGCACGTGGTAGAGAAATAATGAGGAAGCTATATCAAAATAGCTTGTGCCATACAAGGACCTTTTCCAGTTTCACTTTGAAATCTCACAAGTCTTGCCACTTTGAATGTGTCTCGGTATGCACTAAATTGTTATCCAAAGTACTTGTAACTGCAGAACCAGTAACCATTtgtatattgattattataattttgttgttgttgttaatgtcaATTTTTTTCAGgactattttattaataaaatatattttacagttcttGGAAGATTTTAtgcaatgtaataatttaagaTGATTTGTAAAGGTACAAAAATGACCAAGCTGAGGAAAGTTCAATaaaaaattgtatgtatgtttgcgaataaatttgtatatttcttttctctttttcaaggCTCAATATTGTTAATCCTAGAAATATAGCACTTTCCCATGCAAACTTATCATATAACAGTAATTTCTGTagtgtattcaaattaattaaattccc

Function

GO: NA

KEGG:

id description
K12306 MSFD7, SLC49A4; MFS transporter, FLVCR family, MFS-domain-containing protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017701 True 2630 mRNA 0.45 10 18913165 18924436

Neighbor

gene id symbol gene type direction distance location
AMCG00017700 NA coding downstream 1294 18907263 ~ 18911871 (-)
AMCG00017702 NA coding downstream 16658 18890221 ~ 18896507 (-)
AMCG00017704 NA coding downstream 23639 18878222 ~ 18889526 (-)
AMCG00017703 sec24b,LOC105905876,LOC107731363,LOC107596339 coding downstream 34975 18865756 ~ 18878190 (-)
AMCG00017696 NA coding downstream 63924 18843890 ~ 18849241 (-)
AMCG00017707 cplx2,LOC107751330,LOC103366469,LOC107562368,LOC107390991,LOC106528338,LOC102782538,LOC100705952 coding upstream 271685 19196121 ~ 19202825 (-)
AMCG00017709 clta,LOC105903562 coding upstream 443278 19367714 ~ 19384083 (-)
AMCG00017711 NA coding upstream 501603 19426039 ~ 19433689 (-)
AMCG00017715 ostc,LOC106609071,LOC106577458 coding upstream 727080 19651516 ~ 19654680 (-)
AMCG00017716 rpl34,LOC107566275 coding upstream 732497 19656933 ~ 19659528 (-)
G92499 NA non-coding downstream 62537 18850062 ~ 18850628 (-)
G92464 NA non-coding downstream 149504 18763097 ~ 18763661 (-)
G92444 NA non-coding downstream 419935 18492538 ~ 18493230 (-)
G92443 NA non-coding downstream 423072 18489551 ~ 18490093 (-)
G92442 NA non-coding downstream 427161 18485267 ~ 18486004 (-)
G92539 NA non-coding upstream 148802 19073238 ~ 19073865 (-)
G92541 NA non-coding upstream 201624 19126060 ~ 19126349 (-)
G92608 NA non-coding upstream 688269 19612705 ~ 19613182 (-)
G92609 NA non-coding upstream 688805 19613241 ~ 19617787 (-)
G92657 NA non-coding upstream 941536 19865972 ~ 19866417 (-)
G92436 NA other downstream 449989 18462784 ~ 18463176 (-)
AMCG00017675 NA other downstream 1123416 17781648 ~ 17789749 (-)
AMCG00017665 NA other downstream 1425668 17468605 ~ 17487497 (-)
AMCG00017663 NA other downstream 1518116 17387484 ~ 17395049 (-)
G92129 NA other downstream 2882260 16030402 ~ 16030905 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other upstream 488551 19412987 ~ 19419356 (-)
AMCG00017725 NA other upstream 1377564 20302000 ~ 20358625 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other upstream 4393657 23318093 ~ 23321954 (-)
AMCG00017819 NA other upstream 5340243 24264679 ~ 24270595 (-)
AMCG00017839 NA other upstream 6021659 24946095 ~ 24949136 (-)

Expression


Co-expression Network