AMCG00017711


Basic Information

Item Value
gene id AMCG00017711
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 19426039 ~ 19433689 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017711
atatatatatatatatatatatatatatatatgtcatatagATATCAGGGTGTGTCTCCTCATGGTAGTTGGCCGTAGCTCAATCTGCTGAAGGCAGTTAAGCAACAGTCAGGTAGGAAGTGTCAAAATGGCTGAGGGATTCTCTCCATCAGAGCCCATCTGTAGTGTGTGCCAGGGTGTCAGCAAGGTGCCTGTCATGCTCTCCTGTTGGCATCCCTTTTGTTTGGCTTGCATTGAGCGTGTCTGGTGCCAAAACCCCAGCATTGACCATGGCTGCCCGGTGTGTCTGAAACTGCCTGTCTCATATTGCCCCGCAAAAAACCCCGGGATGCCACACTGTCCCGTGGGCGTGTTATGTGACTTCTGCCTTGGGGAGAAGCTGCCGGCCCTGAAGACGTGTCTGACGTGTATGGCCTCATTTTGCGAGGACCATCTGCGGCCCCACCTGACAGGAGAGACGTTTCGGAGCCACCGACTGGCCAAACCCAGTGATGACCTGAGTGGGAGCTGCTGCCTGGATCACGGCAAGCCACTGGAGATGTTCTGCAGAGACTGTAAGCTCTGTGTCTGCAACGTCTGCCCCATCCTAGGCTGCCACCAAGGCCATCGCATCAACATCGTGGAGCAGGAGGCCCTGGAGAAACGGAATCTACTCAAGGTTTGTCTAAACAGGATGAACTGTAAGAACAAGCAAGAATCTGCCAACGTAAAACAGACCCAAAAGGCTGTTGATGATCTCAAGGCCTTGACAGGGGAGAGTATGGCATGGCTTTCACAGCGCTTCACAGAACTGCGCCTCCTGCTGGACGAGGAGGAGAGAAGAGCCAAGGGGTTTGTGGAAGAGCAGACACAGGCCGCTCTTCTCATTTACGATGAGCAGGTCAGGGCCTGCAGGGAGCGCATGGAGGTCACTGACGGTTTCGCACAGACAGTTCAGGAGATCTACAAACATGATGACAGTGTGCAGCTCCTGAAGGACTTCACAGCAGCAGAGAAAGAGATGCAGATCCAACAGCAGCCTGCTGACCAAATTCACCCAGTCCCCCTGACCTTTGACACAATGCACACATATGTTACCAGCTTCCAGAAGGCTTTAGAGACTAGCCGAGAGACCGTGAGCTGCGGCTGGCTAAGAAAGTCTTATCCTGACGGGCCGCTGCGCTTCAACAGGCTTTGGCAGGTGCTGGGCCGGGAGTGCTACTTTGCGGGACGCCACTACTGGGAGGTTGACATGCAGCGAGCAGGCAAGGGCTGGTGGGTGGGAGCAGCCTACCGCTCCATGAGCCGCAAGGGGGATACGGAGGCTTCCCGTCTGGGCTGGAACCGGGCTTCTTGGTGCCTGAAGCGCTACGACCTGGAGTATTGGGCCTTCCACAATGGCACCCGCACCCCCGTGCTTTTGGAGGAGGACCCTGAGAGGCTGGGGGTGTTTCTGGATTATGAGGCGGGTATCCTGAGCTTTTTCGATGCCCTGTCAGGCATGCGGCGCCTCTATACCTTCCAGGCCAAGTTCACCGAGCCAGTGTACCCGGCCTTCCGGCTATGGGAAGGAGCTCTTTCTTTCTGCAAACTGACTTGA

Function

GO: NA

KEGG:

id description
K12004 TRIM14; tripartite motif-containing protein 14

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017711 True 1579 mRNA 0.55 5 19426039 19433689

Neighbor

gene id symbol gene type direction distance location
AMCG00017709 clta,LOC105903562 coding downstream 41956 19367714 ~ 19384083 (-)
AMCG00017707 cplx2,LOC107751330,LOC103366469,LOC107562368,LOC107390991,LOC106528338,LOC102782538,LOC100705952 coding downstream 223214 19196121 ~ 19202825 (-)
AMCG00017701 NA coding downstream 501603 18913165 ~ 18924436 (-)
AMCG00017700 NA coding downstream 514168 18907263 ~ 18911871 (-)
AMCG00017702 NA coding downstream 529532 18890221 ~ 18896507 (-)
AMCG00017715 ostc,LOC106609071,LOC106577458 coding upstream 217827 19651516 ~ 19654680 (-)
AMCG00017716 rpl34,LOC107566275 coding upstream 223244 19656933 ~ 19659528 (-)
AMCG00017720 NA coding upstream 262864 19696553 ~ 19810128 (-)
AMCG00017728 NA coding upstream 435310 19868999 ~ 19869457 (-)
AMCG00017724 ddit4l coding upstream 455247 19888936 ~ 19890529 (-)
G92541 NA non-coding downstream 299690 19126060 ~ 19126349 (-)
G92539 NA non-coding downstream 352174 19073238 ~ 19073865 (-)
G92499 NA non-coding downstream 575411 18850062 ~ 18850628 (-)
G92464 NA non-coding downstream 662378 18763097 ~ 18763661 (-)
G92444 NA non-coding downstream 932809 18492538 ~ 18493230 (-)
G92608 NA non-coding upstream 179016 19612705 ~ 19613182 (-)
G92609 NA non-coding upstream 179552 19613241 ~ 19617787 (-)
G92657 NA non-coding upstream 432283 19865972 ~ 19866417 (-)
G92660 NA non-coding upstream 433729 19867418 ~ 19867636 (-)
G92682 NA non-coding upstream 472303 19905992 ~ 19920152 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 6683 19412987 ~ 19419356 (-)
G92436 NA other downstream 962863 18462784 ~ 18463176 (-)
AMCG00017675 NA other downstream 1636290 17781648 ~ 17789749 (-)
AMCG00017665 NA other downstream 1938542 17468605 ~ 17487497 (-)
AMCG00017663 NA other downstream 2030990 17387484 ~ 17395049 (-)
AMCG00017725 NA other upstream 868311 20302000 ~ 20358625 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other upstream 3884404 23318093 ~ 23321954 (-)
AMCG00017819 NA other upstream 4830990 24264679 ~ 24270595 (-)
AMCG00017839 NA other upstream 5512406 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 5563855 24997544 ~ 25018212 (-)

Expression


Co-expression Network