AMCG00017735 (mtap)


Basic Information

Item Value
gene id AMCG00017735
gene name mtap
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 20571457 ~ 20584961 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017735
atgtgtgaatgtgtttgtcCAATCTGTCAACTTTCTGACTTAAATCAGGTGATCCTGGAGGTGGCAAGGAACCTGGGGGTGAAGTGCCATCCAAAAGGCACCATGCTGACGATCGAGGGCCCCCGTTTCTCCTCACGGGCCGAGAGCCTGATGTTCCGGCAGTGGGGCGCCGACGTCATCAATATGACCACGGTTCCAGAAGTGGTGCTGGCCAAAGAAGCAGGCCTGTGCTATGCTAGCATCGCCATGGCCACAGATTACGACTGCTGGAAGGAGCATGAGGAAGCGGTCTGTGTAGACAATGTGCTTAAAACAATgaaggaaaatgcaaataagGCTGCAAGCATTCTGCTAACTGTTATACCACAGATTTCCAAAATGGATTGGTCCCAGACAATGAAGAGCATGAAAacTGTCGTGCAGTCTTCAGTAATGCTACCAAAGCACTGAAGAGAATTGAAGGAAGGTTTTGCCTCAGCTACATCATTATAAAAATAGAAGCTACAAAAAGAAGCAACCCTGTTGAATGTAACCTGCTAAAGCACGAAGTTCATATTACATGTTCTATCTGATGTGTACGTATCaataaaatgtaagcaaagTGCCTGAATTGCATGTTTTATACTCGTGGAACTGTTCCACATTAACAGGGATGTAAAAAGCTCaggattcatttttatttcatttttcagaacTCAGCATTTAAACAGTTACTGCATGAAACAAAGCCccttgtacattttaattgattttgtgcGTCTATTTCCATGCAAATGTGGAAGTGTCTGGTTATTAGAGGCTGCATACATATACTAAATAACTATGCATTAATGACTCACATTGGACCTTTAAAAACTGATGATTTACTCTTCCATGTTAATGTTTCTGCAACATATAAAAAATGCTGGCAACAGCATATCTTTAGTAGATGGACAAATAAAGAATGACTGATATTTCTATTTCCACGGTGAGGCTTTTTTTCCAGTATATAATGATGCCTTGGTACCCAATGTCTGATGTCTGGAAACATACTAAGACACTGTTACTGATGCGTTCCATATCAACtttaattgcactgtaatttaaGGTAACATGAGctgaatttacattttcatgagAAGATATGAGCTTCCATTTGAGAGTGCTATTTATGTGTAAATAAGTTTAACCTCATCCTTTAACTCTAAAAAGCATTCTTACACATTGGGGAAAAGGCTTGTATGTGCTCCATAATTCTGTGAGAAAACAACCATCCATGGAAGCTGGTGAAACGTGATCTCATTGGTTATTCAGGCAAATGCAGTTTTATACAATCATTTGCATTCGTCCTAGACTTTTTCGGGAAATGAATGGCTGAATTTACATGCAACTGAGAAACTCCAGATTATCTGCTACTGCATTGAAAATAGGACATTTTATACACTTTCATATATTTCTTACAATTttggtgatttgttttcctaaaaAGTGGGAGGAAATAATGTTCACCCGCTATAAACGTGTGCAAGTCGACTGAAGAACCCCACTGGTTGTACATGGCAACAAGTTCAAACTTtgcattactattattaaattAAGGTTAATAGTAATTCAAAGAATCTCTCACTATGCCTTTCACAACTTCATTCCAATCATGAGTAATACAGTGGTGTTTTTTATGTACAGGAAATGGTCTGTGCAGTGGGGTGCggtaaatgcatttcagattggAGTTTGTTGAATTTCTGCACACAGCCCTGGCGTTTTACTGTGAGAACGAGGAAGCAGCTGTCCTCCCAGTGCTCGGCAcaaattgattaaaacaaatttatACAACTGAATAGagcatacaatattttaatttctttaattctAATTTCATTCAATTTTAGTGACTGAAGTTGAAACAAAATCTAGTGATATGCAGCTACTCTAACCCTTCCTGAgtggtaataaataaaatacatagatcACACAATACATAGatgtacaaaatattaaacaattattactCTCAAATCTTTTGAAATACtccttaaatgtattttttttttaacccaaaaGGGAGAAGCTTTCATCTGAAAATGTTCTATGGAGGCCCTTGGATCAAAAtcttaaacatgtaaaataaatcgaTGTGTATAACATATCATGTAGGtgtacattatttaatacagtataaaagcaagctgcatttgtttttctctgtagttcaagaaaacaaagaacTAATTATAATTAAGAATGAATTATATGATGTAGTTTAATACATGCAGGCAGGTTATTAACTTttacagaggaaaaaaagcttttcaatcAAATTTAAATCTGTTCAAAATAGCATGAAATGGAGAGCAGCAACAGACAACGTGAGCACAACGGAAATCATtcaaaagaacaacaaacacCCTTCTAATGAAAACTTTGTGTgggaacaaatacatattttgtgtatgtgtgtaacaTTTTCCAGCTGAAGTTTGGagattgtattaaaataagtatagtttCACTCCAAATGTTAGACTTTCAACAAGAAACTGTATTGCTATGCcttattttttggtttgatgtatgatttattggtaaCTTAAAAAGTTAAGATTACAAATCATTCAATAGTTTTGCAAATTACTTTAaagtatgttattattaaatatgtatgctGTTATATTTGGAATATGGACTAAATTAAACAACCATGACACTAATTACATATTTGGGGAAAAAGGTACATTTTGGTTCAATTGAGAAGTAAAATTAGAGGTCCACTTATGAACACTTTTTCAGACCAAATAGTAGAGCAGTATTATGTGTATTATCTTTGCTCACTGCAAACACAAtataatgtacaaaaacaatcatacaattgctgatatatttatgattaaaatgatATTAATTTCTAGTGGATAAGAACTTGGCAGTATTGTAGAAATATTATTCCTTAAAGCTCTGGGGCAGTTCCCCtttcattaatgttttcttCGTTTCCCTCCTGTAGCTCATGATTGCAATATTTTGCAATATTCTCTTGCAAACCAATTATTTGTAGCTGGTTTCAGGTCTGCTGTGGAATGATAAAGCATAATGGGTGGGACTCAGTTCTGTGGCATTACTGTGTGTGCTGTTCAGATGTATGCTACAATAAAGCTCGTCTATGAAGCCTTTtaatggatgtttttatttttgtatttttattattaaaaagtatgGGCTAAAGTTGGATGTAATAATTTTAAGTACATCTGAAAAATGTGGACTGAAGTGGACTTAAGCTTTCAGCCTTGATATTTCCCCACTATGTGTGAAGTCTTTAAGcatgtgtttgcctttttaaccTAATATTTGTTCCGTTTTAAAAGTACACATTATAGATATTAAAATGGGATCATcaaacatgaaatgaaaatgtttcttaataGGGTGAACTGTGTGTTTGATCTTTGCTATGTTACCTGATAGGTTTGGTGTTCGCCTGGGAACATTACACGTGTATGGTAACCTAATGGAGAATGAATTGCCCTTGATGGCATTGGTTTCCAAATTGTGATTTTTGCCCACACAATCATAAGATTTGTCCCGAGTTTCACTTTTGAGCCACGCACGGTTTCTACACAGGAAATGAAATCAGcagaaaaatcaataaacacatgtaGAGAATATAAACGAAACTGTTATCGTAGACCAGAAAAGTGATAATGTTACGCATGCACCTCTAATATTTGCCCCCCATGTCCCACCTCTGTGGATTATTCACTTAAAAGCAGGCTGCCGTCATCCATGTCCTAAATGAATAGTGTGTATAATATGAGTCTGAGATGAGCAAGGCTGAAGTAGCTATGCAAATGGTCCACGCCTTTCCCTATCTTCTGGCAATGTAATCTAATCCTTGGGACTTTGCCAAAAATTAATTTTGCCAGTTGTGTTTGGGTTCAGAGGTTGTTATTGGGGACTTTTTGTCAGTGGGGTCTGCGCTCTCATGCTTCATTGTTGGAAgtgcatttgtatacatttcttcCACACCAGGAACACTAAGCTACAGAAATAGACCCTTTGCACGTAGAAAAtagatacaatattttaaaataattgttcataCATATCtacaatgaaaatgttactttgctatgttttaaaatgatatttatttatgtgtgtattgtcTTCTGGCGCTATTGCAGACAGTATGTCTGCATTACAAAGTTTCAGTTCTTGTATGTAACTTTATgctaatatacataaaaaaatgcttttctataAGGCTTTCCTGACAGGAAAGCAGTGATGACTCTTAATTAACTCCAGCCTACGTATAACCAGGCTGGTCGacctatatttaaatgttaatgtcatTATCAATGCTCGCTAAAATTATCTACCCGGAGCAGCTGCTACTCGGTGCCAATGTTTGAGTTGCCTGTAACCAATAGGACTGTCGTGTGTTCAGACAGACACATTATATGATACTTTCATTCTCCTGTACTGTTTCGTGATATTTTCTAACATTATTGTAACTTAAGAATGAACTAATTTATTGCCGTGTAccaattaatgtttgttttcaactatTAATACcgatttcacttttattttaatattcatccaCTGCACGGAAAGAGAGCATCACCCTAacgtcaaaaaaaaaaaaaaacatttacacgtacacatgcttttaaaccatgtacatgtgtgtatgtatatatgggtgtgtatgtttgcatgtatgGTATGTATGGTTTTAATGTTGTGCACAGGAGGTCCGTTCTTCATTGAGTGACAATGACATGAAACACAGAATGATGGTGACATTTAAGGgacaaatctattttaattatagttATTGTAAATTGTCCTTGTACTAgattaatacagaaaaaaacgttattatttgtattacgcatatataacattataacaaACTCACTTTCTGTGTAATCCGAAGTAAGACCGGAGCAGAAGCGAAGCACTGAAACCGAAAGCCAGAAACCACAATCATAATCACCCTGCGGTCTTAACACCTTAACCTTGTATAATAATCATTACAATCATtaacatcatcattattttacaaacaccaggcatttgcttttgaaaaccGACCATAAAAGGCTGCCCTTCGTGCGTGACCCACTGACACGCACATCCCCGAGTCGCCTTTCAAACGGCCGAGGAGACGAGTTATATAATTGTacgtttaaaaatgaaacattatagTTTTGATTCAATCAACACATTTCTATTGCGGTTGATGGACTGAGGCTATGATggttatattatttgtaatgtaagcATATTGCTTGTTTCAATAACTGGCCGTTTTCTTTAGTGATGTGAGACATACCAGTGACACTGAACGTATTTTACTCTGCTTGCCCATCAATAACGTGTAGTGTTAAAAATACTGTAGCCTAGTACTATTAAGAAGGAGAGAATTGGGCTGAATtcgttgtatttctgtgtgattAAAGTCTCCAACCACTGTTTCCATAAAAACTTTATAAATTACTTACTTTATCAATTATATCATTCTGACAGCCGCAGTTTGCaggtattttaaaactgaagtgcAGATGTGTAATAGACTATATCAACAATATTAAGGGGGGAAACGCTAAAATAAAtagagtaataaattaaataaataaagatgtaaGGTTAATTCCCCCATTCCCCCACCCCAAATGAATGCGGACACTAAATATCCTCCTGTCACTGCACTCTTCAATCTTTAAAAGCTGTTTGAGCCGATCTCAATCCcctttctcttaaaaaaaaccCTAAAGTCGATTGATTTCGAAAATACATGAATTTATCATTAAGTTAATAAGATCGTATTAcaagattttaaattatatatatatatagcaatgaTTATTACTAGCATCATAGTAATCATATATATCATGcctatattatatacatattgaaaggtcaattattagtattatatacaatatatacattttcttagtaagaaaaaaataaatcattttctaaatatattaaatatttatataaaaaatattatttgacgTTTGCTTGGTCAGTTCTTCATTTCATcttccaaagaaaaaacaaaaactaaactaaaacatctTGAGTTTCCAGAAATGCCACCACGTCCTCATGTCCGTTTTCCAGGGCCAGGTCAATCGCCCTCCGGCCGCTGGTATCCCTGGCATGGACGTTGGCATCGTGCTGGACCAGAGTCTCCACCGTGTCCAGAAAGCCTCCCCTGGCGGCGTCATGCAGCGGGGTGGCGCCGGTGCCATCGGCCACATTGGGGTCTGCCCCATAGGACAGCAATAGCTTAGCTACAGGGGTACTGCCCATCATCATCACCTGTATAGCTGTCCGATTGAACCTGTTCAGCGCATTGGCACCGGTGCCCTGCTGCAGCAGCGCGCACACCCGCCCGGTGTCGCCGGTGGCCGCGGCGGTGGAGAGCTCCTCGGCGGTCATCGCGCCTCTCGGTCCCCGGTCCACGGCTCGGTGTGACAGGTAGCCCGTGTCAGCGTCGCATAGCGCATCCTGATATCACAACACTGGTATGAAAAACAACCCGTATTAACACCTTTTTCGTCGCCCTTTATACGTGCGGATCATGAAAATGAGCGGACGCGTCCAATTGACCGCCCCGGTGTCGGCGCTGTCCTCCCGGCCACTAGCGCATCGCCGCCGCGCAGAGATCTGTTCTGACTTGCCTCTCCGACACAAAAC

Function

symbol description
mtap Predicted to enable S-methyl-5-thioadenosine phosphorylase activity. Predicted to be involved in L-methionine salvage from methylthioadenosine. Predicted to act upstream of or within purine ribonucleoside salvage. Predicted to be located in cytoplasm and nucleus. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in biliary tract benign neoplasm and diaphyseal medullary stenosis with malignant fibrous histiocytoma. Orthologous to human MTAP (methylthioadenosine phosphorylase).

NR:

description
PREDICTED: S-methyl-5'-thioadenosine phosphorylase

GO:

id name namespace
GO:0009116 nucleoside metabolic process biological_process
GO:0017061 S-methyl-5-thioadenosine phosphorylase activity molecular_function
GO:0004645 1,4-alpha-oligoglucan phosphorylase activity molecular_function

KEGG:

id description
K00772 mtaP, MTAP; 5'-methylthioadenosine phosphorylase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017735 True 6702 mRNA 0.37 4 20571457 20584961

Neighbor

gene id symbol gene type direction distance location
AMCG00017738 NA coding downstream 47 20553667 ~ 20571410 (-)
AMCG00017734 LOC103364796,LOC106608959 coding downstream 20621 20520218 ~ 20550836 (-)
AMCG00017736 tmod1,LOC102782831 coding downstream 56792 20498267 ~ 20514665 (-)
AMCG00017729 NA coding downstream 88705 20458215 ~ 20482752 (-)
AMCG00017731 nfib,LOC106608626 coding downstream 163199 20393877 ~ 20408258 (-)
AMCG00017739 mtap,LOC107595051 coding upstream 10351 20595312 ~ 20601401 (-)
AMCG00017733 NA coding upstream 18394 20603355 ~ 20616229 (-)
AMCG00017741 NA coding upstream 35445 20620406 ~ 20622105 (-)
AMCG00017737 ndufb6 coding upstream 41123 20626084 ~ 20627983 (-)
AMCG00017749 LOC107702147,LOC107737977 coding upstream 68184 20653145 ~ 20667672 (-)
G92714 NA non-coding downstream 155845 20415306 ~ 20415612 (-)
G92682 NA non-coding downstream 651305 19905992 ~ 19920152 (-)
G92660 NA non-coding downstream 703821 19867418 ~ 19867636 (-)
G92657 NA non-coding downstream 705040 19865972 ~ 19866417 (-)
G92609 NA non-coding downstream 953670 19613241 ~ 19617787 (-)
G92798 NA non-coding upstream 39182 20624143 ~ 20624420 (-)
G92800 NA non-coding upstream 49711 20634672 ~ 20634880 (-)
G92822 NA non-coding upstream 87104 20672065 ~ 20676278 (-)
G92823 NA non-coding upstream 91698 20676659 ~ 20734422 (-)
G92836 NA non-coding upstream 232714 20817675 ~ 20822960 (-)
AMCG00017725 NA other downstream 212832 20302000 ~ 20358625 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 1152101 19412987 ~ 19419356 (-)
G92436 NA other downstream 2108281 18462784 ~ 18463176 (-)
AMCG00017675 NA other downstream 2781708 17781648 ~ 17789749 (-)
AMCG00017665 NA other downstream 3083960 17468605 ~ 17487497 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other upstream 2733132 23318093 ~ 23321954 (-)
AMCG00017819 NA other upstream 3679718 24264679 ~ 24270595 (-)
AMCG00017839 NA other upstream 4361134 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 4412583 24997544 ~ 25018212 (-)
AMCG00017861 LOC103354863 other upstream 5360180 25945141 ~ 25957648 (-)

Expression


Co-expression Network