AMCG00017738


Basic Information

Item Value
gene id AMCG00017738
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 20553667 ~ 20571410 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017738
AGTAGAGCCAGCCCACAAGACCAGGAACAGGAAGAGCGAGTGCTTGAGCTTGTTTGTATGACCAGCTGAACAGCGTTTTTCTGCAGGAGGTATCTAGGGGTGGACGaacaATGTGCTGTGCAAGAtgaaacagcaacaaaaaaagaagaccTGAAATTCTTTTTAGTCTACTGTTGCACAGGAGCACAAGGGTCTGTCAATAAATGTCCTGGGGATTATTTGCTTCTGGTGATATCACTATAAAGTTTGGTTGCAGAGTAGACGTGGTCAAAGGTAATTCCCATATTCTTGGTGTTTATAGGACGGCTGTATGGTACATAGCTATAAAGAGAACTGTTCCGGGAACAGTCATGCTACCACTCACCTCGGATGAAAGAATGATGTTTCCTAACCAGACATGTGAAAATGAGGTGTCCATGGAGCTCTTCCTGCACTGTTCTCTTGTCCCCGCGTTCTTCATCGTGGCAGTGCTGTCTTTTCTGCAGAAGAGAGTTCACCAAATGGTGCTGGATGAGAAAATCCCCCTTATCAAGGGACGCTTCGGCATTGTTGTGCCATTAGACTTTATTGGAAGTCTCAGTAACAGATGGTCCTATGGCTTTGCCTTCGGAGCAGTGTCCGCTAGTGTGATACTACTGTTCACTGAGGAGTATGTACCATTTCATGTTCCAACGTGGGCTAAAGCTATTATGTACTTTGTGGGAGCTATTGAAGTGGGACTGTCCTACTTCCCTTTCTTTGCTTGCCTTTCTACAAACTTCCGGGTAGTTGGAGGAGTGCTGGGGATCTTATACACTCTGACCTGGATAAGTGTTACACTTTGGGATCTAGTGACATGTCCTAGCGGTCAGGTACTCGGCCAATACCAGAAAGTTATTTTCCAGTGGCCATGTATCCTGTGCCTGATCTTCCTGCTGTGCCGTTTTGTCCACATGCTGGTCAAGGCGTTACGTATTCATCTCCAAATAGAGAGGGAGGAGGAGAAAGAGCAGCTGTTGCAGACATACCAGGCTCAGTATGTGCAGACCTTGCTGAGGAGACCCCCTTCTGGGGAGTTGAAGAAGAACTGGtttcaaaggaaaatatatgACTGGGACCCTTATTTCAAGTTCCCTAACAGAATAATTGGCACTTCTATCATTTCTCTAGTTGGCTTGTATATTTTTACTCTGGCAGACTACAGCATCAGTAACTATGCCTTTGATCAACTGGATTTTTTGACAGAAGCCCTGAAGGATCTATCTTCATCCAGCAATCAAACAGGGAATATATTGGCAGCGTTAATCCCTCAATTTGAGGAGTTTAATGTGGTAGCCAGAGGTGCCTGGTTGGCCACAACGTTTTTATCTAGTCTGACCTCTGTCTCCTACATTTTTCATGTGTTAGCCTGTTACAGgAAGCACCTGAGGCGGTTATGGGCTGGACAGAAAGGATTTCTACCAGAACAGTTTCACAACCCCAGCCCTGCAGGCAGTGTGGCTGCCATTGTGAGGTATTCGGGATGGCAAATAGCCTTTACGTTATGGGGTTACTTGATTGTTCATTTTGTGCAGTTCCTGTTTTCTCTGATACTTGCTTATGGATTGATTCTGCCAATCGCGAATGGACTGGTGGTGCTTCAGGTTATCCTTGTTCAGGTTTTCTTCCTTCAAGATAAGATTTCACCAACAGATAAACAGAAGCCATTAGCACTAAACAACAGGAAAGCTTTCCATAACTTCAactatttcttcttcttctacaaTGTGATCTTGGGTATGAGCAGCTGCATTTTAAGGCTGCTGTTCAGCTTTGTTGTGGGCACGTGGCTGGTGGCACGCATTGACCGCACAGTCATGCAAAAAGGGTACGAGGGCTTGGACCCAGGGTACAAAACCTGGATTGGCATGATATTTGCTGACCATTACCACAGCAATCCTGTCATGATTTGCTTCTGTCATCTACTGTTAGTTGAAAATCTTGAGAAGCAAAAAATAAGGACTTCAGCGTATTCCTCGTTTCATAACCTCTCACCTGAGCCAGCAGTGAACAGTAAAGCCAGAGGGAGGTGGATGCTGGTTTATACTCTGTTGAGGAACCCCAAGCTCATACTACTGCGCAAACGCAGGGGGTCTTTGAGCAATTCAGGGGCGCAGAGAGCCAACCTGGAAACTGTGATCCTGGCCTATGCGTTGGCCTCACGCTACAGGGACCCCACAGAGACAGATGCAGTCGACATGCTGACCAGACAGCATCTGGACATGGTGCTACCCACAGACACCACAGACACCACAGAGGTGCCCCACACTTCGTAAACATGATCACCCTCGCCTCGGGCTGTTGATAGCCCAGCCAGTCTAACTAAAGTCTCCTCTGTTACATAGATGAGGGCCACACAGGTTCTATAGAAGGGGTGTGGAAACTACCATCCAAAGTTTAGAAGAAGAAGTCCATGCCTCAAGATGCAATGAGGAGTCAAAACACTTGAAGCTGTCCATCAGCTAACCAGTACAgtctttcaaaaatgttttctgaaactgCTATCCTCCCGGTAGAAATGTGAATAGTCTTACACAGTGGTAGTGTGAGGTTTTAATTTGCCCTTCCAGTAACAAAGCACCAAAGCACCAACAATTGTTGATGgagattttatttcttaattttctttttaaattacagagaAACTGTAGTTTTGTGGTAATATCTCATATGGTACTTAATTTTGATTGTACAATTTACTTTAgggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017738 True 2726 mRNA 0.45 19 20553667 20571410

Neighbor

gene id symbol gene type direction distance location
AMCG00017734 LOC103364796,LOC106608959 coding downstream 2831 20520218 ~ 20550836 (-)
AMCG00017736 tmod1,LOC102782831 coding downstream 39002 20498267 ~ 20514665 (-)
AMCG00017729 NA coding downstream 70915 20458215 ~ 20482752 (-)
AMCG00017731 nfib,LOC106608626 coding downstream 145409 20393877 ~ 20408258 (-)
AMCG00017726 LOC102788851,LOC106608629 coding downstream 567052 19973418 ~ 19986615 (-)
AMCG00017735 mtap coding upstream 47 20571457 ~ 20584961 (-)
AMCG00017739 mtap,LOC107595051 coding upstream 23902 20595312 ~ 20601401 (-)
AMCG00017733 NA coding upstream 31945 20603355 ~ 20616229 (-)
AMCG00017741 NA coding upstream 48996 20620406 ~ 20622105 (-)
AMCG00017737 ndufb6 coding upstream 54674 20626084 ~ 20627983 (-)
G92714 NA non-coding downstream 138055 20415306 ~ 20415612 (-)
G92682 NA non-coding downstream 633515 19905992 ~ 19920152 (-)
G92660 NA non-coding downstream 686031 19867418 ~ 19867636 (-)
G92657 NA non-coding downstream 687250 19865972 ~ 19866417 (-)
G92609 NA non-coding downstream 935880 19613241 ~ 19617787 (-)
G92798 NA non-coding upstream 52733 20624143 ~ 20624420 (-)
G92800 NA non-coding upstream 63262 20634672 ~ 20634880 (-)
G92822 NA non-coding upstream 100655 20672065 ~ 20676278 (-)
G92823 NA non-coding upstream 105249 20676659 ~ 20734422 (-)
G92836 NA non-coding upstream 246265 20817675 ~ 20822960 (-)
AMCG00017725 NA other downstream 195042 20302000 ~ 20358625 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 1134311 19412987 ~ 19419356 (-)
G92436 NA other downstream 2090491 18462784 ~ 18463176 (-)
AMCG00017675 NA other downstream 2763918 17781648 ~ 17789749 (-)
AMCG00017665 NA other downstream 3066170 17468605 ~ 17487497 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other upstream 2746683 23318093 ~ 23321954 (-)
AMCG00017819 NA other upstream 3693269 24264679 ~ 24270595 (-)
AMCG00017839 NA other upstream 4374685 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 4426134 24997544 ~ 25018212 (-)
AMCG00017861 LOC103354863 other upstream 5373731 25945141 ~ 25957648 (-)

Expression


Co-expression Network